Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  157 bits (396), Expect = 4e-43
 Identities = 100/296 (33%), Positives = 153/296 (51%), Gaps = 11/296 (3%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M  ++ +  FVE A  GSF++AA  L L+   VS  I+ +E  +   L  R+TR + L+ 
Sbjct: 1   MDKISAIRSFVEVASCGSFTQAAEQLGLSRLQVSRHIQEVERWLGLRLLHRTTRSVSLSV 60

Query: 61  EGE---IFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIAL 117
           +GE   I+  K    +A LQ    +    R +L G + I++P  LG+ LL D +D+F   
Sbjct: 61  QGEEAFIYCQKILDEVAALQNRAQR---HRQELVGSIRIASPIGLGQALLFDAVDDFTRE 117

Query: 118 HPNVTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHP 177
           HP V V+L LSD +  +    VDIA+RY Q  D +L+A  L    + VLCASP+YLA H 
Sbjct: 118 HPEVKVQLQLSDEMVQLVDERVDIALRYTQQPDESLIARRLMHI-DSVLCASPDYLAGHE 176

Query: 178 PILHPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKG 237
           PI   DD+  HNC    L      +W+  ++ +     + GN   ND  V+ + A++GKG
Sbjct: 177 PITSLDDITAHNC----LLHASQTRWLFVKDNQNIEKKISGNLQANDMGVLIKAAMRGKG 232

Query: 238 IANKSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREK 293
           + +      +  +  G LV +LPE+      ++ V   R      IR F +F+ E+
Sbjct: 233 LIHLPCDLANAHLASGELVELLPEYHLPGKTLWAVYLSRSYQQHLIRHFIDFLAER 288