Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  203 bits (517), Expect = 4e-57
 Identities = 115/296 (38%), Positives = 172/296 (58%), Gaps = 2/296 (0%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M  L DL L +  A   S S AA  L +T A+ SAA++RLE ++   LF RSTR+++LT 
Sbjct: 1   MYHLKDLQLAIRIADLHSISAAARELGMTPASASAALQRLEHKLNCQLFARSTRNMQLTE 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
           EG+ F+   + AL+ LQ   D +A  RG+L G+L I+ PSDLGRN +  W+DE  A  P 
Sbjct: 61  EGQAFIDTGRQALSLLQGASDALADKRGELRGELRIALPSDLGRNRVRAWLDELTAEAPE 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           +T++L   D+L D+ A  V +A+RYG+  DS+L+   L   + RV  ASP YLA H    
Sbjct: 121 LTLRLYFGDQLDDLIAQNVHLALRYGELQDSSLMRRQLARMH-RVTVASPVYLARHGRPS 179

Query: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240
           HP  L  H  L     +T  +KW  +   +   V + G+ +CNDG V+   A+ G+GIA 
Sbjct: 180 HPQQLSQHKILLLNRGNTPWHKWRFAYKQQPLEVELTGSKSCNDGAVIKEWALAGEGIAY 239

Query: 241 KSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREKGCQ 296
           KS  D++Q++ +GRL  +L ++ + P+P+ +        +  +R   EF++EK CQ
Sbjct: 240 KSWFDVAQEVTEGRLELLLVDYLADPIPLQLTYLQTEYPSHKVRTCIEFLKEK-CQ 294