Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (659), Expect = 1e-73
 Identities = 130/301 (43%), Positives = 194/301 (64%), Gaps = 2/301 (0%)

Query: 4   LNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTHEGE 63
           +NDL LFV  A  GS S AA  L ++ A  SA+++RLE+++   LF+RSTR +RLT  GE
Sbjct: 3   VNDLLLFVRVADCGSLSGAAVELEISAAVASASLKRLEKELDTVLFIRSTRSLRLTDAGE 62

Query: 64  IFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPNVTV 123
            +L+  + AL  L+ G   +ACA+ Q+AG+L ++ PSD GRN +L W+D  +  +P + +
Sbjct: 63  RYLSYCRRALEDLRLGEQALACAKSQIAGKLSVALPSDAGRNYILPWLDHLMDEYPRLQL 122

Query: 124 KLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPILHPD 183
           +L L+D LT+ Y + +D+A+R G P DS+LVA  +C S +R+LCASPEY+A H       
Sbjct: 123 RLHLADSLTNFYHDKIDVALRSGTPKDSSLVAFKIC-SAQRILCASPEYIAVHGRPETLS 181

Query: 184 DLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIANKSL 243
           DL+ HNCL FML +  H++W   R+G++H V V GN  CND EV  + A+ GKGI  KS 
Sbjct: 182 DLEKHNCLFFMLDEKTHDQWCFYRDGQSHRVRVSGNRTCNDAEVARKWALAGKGIVYKSS 241

Query: 244 MDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREKGCQQRRAVLT 303
           +D++ D+  G LV +L ++      +Y+VC  R+ +TP +   +E +R++ CQQR   L 
Sbjct: 242 LDLADDLASGALVPLLTQYSGESADLYLVCPGRQHVTPLVLTLREHLRQR-CQQRAKRLA 300

Query: 304 A 304
           A
Sbjct: 301 A 301