Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  194 bits (492), Expect = 3e-54
 Identities = 113/293 (38%), Positives = 165/293 (56%), Gaps = 1/293 (0%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M  +NDL L +  A   S S A+  + +T AA SAA++RLE+++   LF RSTR ++LT 
Sbjct: 1   MYHINDLQLALRIAALESLSAASKEVGMTPAAASAALQRLEKKLGCQLFARSTRRLQLTE 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
           EG IFL   + ALA L+     +A  RG+L G++ I+ PSD+GR+ + +W+DE +   P+
Sbjct: 61  EGRIFLDTAKPALALLETASANLAEHRGELKGEVRIALPSDIGRSRIRNWLDELMDSAPD 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           ++++L   D + D+    + +A+RYGQ  DSNL    L     RVL ASP YLA H    
Sbjct: 121 LSIQLYFGDHMADLIDQNIHLALRYGQLEDSNLKRRQL-SMTPRVLVASPAYLAQHGEPQ 179

Query: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240
             ++L  H  L          KW  S NGE   + V+G   CNDG VV   A+ G+GIA 
Sbjct: 180 TLNELSQHQVLILNRGGEPWQKWKFSHNGEAVEIEVRGKRFCNDGAVVRDWALAGRGIAY 239

Query: 241 KSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREK 293
           KS +D++QD+ +GRL  IL +  +  VP+ +V       +  IR   EF+  K
Sbjct: 240 KSWLDVAQDVTEGRLKLILADKLAPAVPLQLVYLQTDYPSHKIRRTIEFLAHK 292