Pairwise Alignments

Query, 170 a.a., 23S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., TrmJ/YjtD family RNA methyltransferase from Synechocystis sp000284455 PCC 6803

 Score = 43.1 bits (100), Expect = 3e-09
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 15/149 (10%)

Query: 14  PKSPTNVGAVMRAAGCYNATQ-VRYNGTRYARAVKFQTDTQNSHERIGLVEM-DDLTAGL 71
           P+   NVGA+ RA       + +  N     R+V+ QT   ++ + +   ++ DDL   L
Sbjct: 3   PQGERNVGAIARAMKNMGLEELILVNPRCDYRSVEAQTMAVHAKDVLAQAKVVDDLATAL 62

Query: 72  DSEVKIVCVE---------LAVGATALPHFTHPE-QAIYLFGPEDGSLPQEVVDQAHYVV 121
               +I+            +     ALP    P  ++  +FG ED  L  E ++QAH  V
Sbjct: 63  GDRQRIIATSARERILQSPMETPRQALPWLLAPNLKSALVFGREDSGLTNEELNQAHRFV 122

Query: 122 YVPTH---GCMNLAATVNVVLYDRLAKSL 147
            +P H     +NL+  V V  Y+    SL
Sbjct: 123 RIPVHPQYPSLNLSQAVMVCTYELYQASL 151