Pairwise Alignments

Query, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor from Pseudomonas syringae pv. syringae B728a

 Score = 55.1 bits (131), Expect = 2e-11
 Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 19/201 (9%)

Query: 46  VVLSSVVQAQENTEQAVDETVTVHGQSILTDQRTRSDLDKVRGIANADIFSGITSVQSNN 105
           + +S+  QAQ+     V  TV+VH         +R +LD+       D+      V    
Sbjct: 135 ITVSATRQAQDVA--TVPSTVSVH---------SREELDRDNVNTLRDLVRYEPGVSVGG 183

Query: 106 MHNEAGALDIGIRGVQGEGRVPIFIDGSLQSTHTSRGYQGVSDRTYIDTDLLSSLTVNKG 165
               AG     IRG+ G  R+   +DG         G    + R Y+D +++  + + +G
Sbjct: 184 AGQRAGTTGYNIRGIDGN-RILTQVDGVEVPDSFFTGPYAQTHRNYVDPEIVKRVEILRG 242

Query: 166 ATIESSPYASGAVGGVVNATTLGIKDIIKDDQAFGVVLKARANNHN----RTPDVSGDYS 221
               S+ Y S A+GGVV+  TL   DIIK  +  G  LK   ++ +     +  V+G   
Sbjct: 243 PA--SALYGSSAIGGVVSYYTLDPDDIIKPGRNVGARLKTGYSSADESWLNSATVAGRQG 300

Query: 222 E-QGQYALDERGEHSAFKHGS 241
           E  G   L +R  H    +GS
Sbjct: 301 EFDGLLHLSQRNGHETESYGS 321