Pairwise Alignments

Query, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 885 a.a., iron/heme transport protein from Sinorhizobium meliloti 1021

 Score =  125 bits (313), Expect = 1e-32
 Identities = 181/776 (23%), Positives = 292/776 (37%), Gaps = 145/776 (18%)

Query: 82  DLDKVRGIANA-DIFSGITSVQSNNMHNEAGALDIGIRGVQGEGRVPIFIDGSLQSTHTS 140
           D  + R   NA D+   +  V SN    +   + I +RG+Q + RV   IDG+ Q     
Sbjct: 182 DAVQSRAARNANDVLDSVAGVTSNRSEAQNPGIAINVRGLQDQNRVTTMIDGARQD--FQ 239

Query: 141 RGYQGVSDRTYIDTDLLSSLTVNKGATIESSPYASGAVGGVVNATTLGIKDIIKDDQAFG 200
           R   G S R Y+DT  L S+ V KGA   +    +G++GG VN  T+   DII  D+  G
Sbjct: 240 RAGHGASQRVYVDTAFLRSVEVEKGAV--AGVGGAGSLGGAVNFRTVTADDIITPDRDRG 297

Query: 201 VVLKARANNHNRTPDVSGDYSEQGQYALDERGEHSAFKHGSLMLGLGYQAESFNTVLAYS 260
           V L A                        E G ++ + +GSL +G    +E F+ +   S
Sbjct: 298 VELNA------------------------ETGTNAYYFNGSL-IGAARFSEDFSVLGGIS 332

Query: 261 KRSKGNHFAGKKGYEEYQEPVVGQGQEVVNTSFESDSWLFKLASDTGT------AHNADF 314
           ++  G++  G+ G    + P++    ++  T+   DS+LF      GT      + + DF
Sbjct: 333 RKRVGDYDFGQNG----KSPLL----DLAVTTAVDDSFLFSRLETFGTLLKVEGSPSDDF 384

Query: 315 NYRHHAQKAGEVLMAYWYKSSEDWEGN-PYPDGKDRMPQWGLGTAKVNTYSANYYYQPDH 373
            +           +++    SE  +G   + D +D  PQ  L     NT S+++ + PD 
Sbjct: 385 TFD----------LSWLRNDSEAIQGGLVFGDLRDD-PQNYLN----NTVSSSFEWDPDS 429

Query: 374 PWLNLNANFWYTEA---DLAQYNGLWALGTNAEQYFHAYHNDRSGLSLTNETLLTQWPVR 430
             ++L    WY      +L  Y       T      +A  +    L  T+        + 
Sbjct: 430 ELIDLKGRLWYNRVVNDELRDY-------TPRLPITYAMTSFGGSLDNTSRFETALGDLS 482

Query: 431 LNYG---LAQQNERLSPEEDGQTRFTKTVTSRH----GKRTAQNLFANADIDYSP-LRVQ 482
           LNYG    +   +  +P       F +    +     G+R+  + F NA +++   L V 
Sbjct: 483 LNYGGEAYSDNGKTTTPPLVDDQGFDEAYGYKGLNPVGRRSMTSAFLNATLEHDDWLEVG 542

Query: 483 LGLNLHNAKSTD---------------------YQTKQQLDYK------------EKLDL 509
            GL     +                        Y   +   Y             E++D 
Sbjct: 543 AGLRYDRYRLKGFTEVGGRKPRYIVVPGVCGYFYDDGECAYYDEDPVYGGGEAVLERVD- 601

Query: 510 LSEFTYALTPSTQL----------FLKSSRTYRMPSLYETTLS-----NEVFSYNPYNPI 554
           + +   AL PS ++          F+  + TYR PS+ E   S     + + +Y P   +
Sbjct: 602 IDKSGGALLPSARIAVMPFEGIQPFVTYAHTYRPPSVMEALTSGGHPGDAIATYIPNPYL 661

Query: 555 KPEQAWNNEVGVQFMASNSVLQDDRLNLSVSYFRNSIKDFISGGRLAKTPGMSEWQAN-F 613
           KPE+    E+G+           D L L   YF  +I+D+I+ G        + +  N F
Sbjct: 662 KPERGRTWELGINIARDGLFTAGDSLRLKTVYFDRTIQDYITLG----NGYFATFDKNLF 717

Query: 614 TFTNYD-KLQLSGWELGAHYQYAWLYTHFAATLYSETKICSVQQAQYAESDTCNSLGFAW 672
              N D    ++G E+ A Y     Y       Y+  K        Y+      +   A 
Sbjct: 718 QHVNLDGDTTMNGVEIEASYDMGSAY---VGASYTYLKTDYADTYSYSGPTASGTPLAAS 774

Query: 673 GLTPTR----IPPKQNLYLNVGTKFFNDTLDSGVKVSYHSGKSNPSDWLAGTAANPILEI 728
           G TP      +PP+    L+ G + F   L  G + +Y S        LAG     +   
Sbjct: 775 GNTPVPSVLFVPPENKFTLDAGIRLFERKLVLGGRATYVSDSKPTVGQLAG-----LFNT 829

Query: 729 PSDYTIDLYSQYELNANTQLFFAINNVTDRYQVRPGSVVSMPDPGRTITLGFEISY 784
                 D+Y  Y  + + +L  AINNVTD            P PGRT T+     +
Sbjct: 830 AGYKVFDIYGSYSFSDSAKLRLAINNVTDEQYAPALGAFYYPAPGRTATVSLNFKF 885