Pairwise Alignments

Query, 784 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 743 a.a., iron transport protein from Sinorhizobium meliloti 1021

 Score = 44.7 bits (104), Expect = 2e-08
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 28/148 (18%)

Query: 514 TYALTPSTQLFLKSSRTYRMPSLYETTLSNEVFS--YNPY-------NP-IKPEQAWNNE 563
           TY +TP  +LF + S  +R P++      +E++S  YNP+       NP +KPE     E
Sbjct: 492 TYDVTPDVELFAQWSMAFRAPTV------DELYSRFYNPFGNYAQLGNPDLKPETGKGFE 545

Query: 564 VGVQFMASNSVLQDDRLNLSVSYFRNSIKDFI-SGGRLAKTPGMSEWQANFTFTNYDKLQ 622
           +G  F           L+  V+ F N   +FI +G  +    G+ E    F + N +K +
Sbjct: 546 IGANF-------DTGELSGRVAAFHNIYDNFIETGDSINSDTGIRE----FKYANVNKAR 594

Query: 623 LSGWELGAHYQYAWLYTHFAATLYSETK 650
           +SG EL A   +   +   A+  YS  K
Sbjct: 595 ISGIELSALKTFDNGFNLHASLAYSYGK 622



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)

Query: 115 IGIRGVQGEGRVPIFIDG---------SLQSTHTSRGYQGVSDRTYIDTDLLSSLTVNKG 165
           I +RG+ G  R+   IDG         + Q    S    G  D    D + LS + + +G
Sbjct: 105 INLRGLSGP-RIVTTIDGVPIPYISNSARQGAFASINANGGGDM--FDFNSLSVVDIVRG 161

Query: 166 ATIESSPYASGAVGGVVNATTLGIKDIIKDDQAFGVVLKA 205
           A  +SS   SG +GG V   TL  +D+I D + +G + ++
Sbjct: 162 A--DSSRGGSGMLGGAVVLRTLEPEDVISDGKDWGAIFRS 199