Pairwise Alignments

Query, 680 a.a., transketolase from Vibrio cholerae E7946 ATCC 55056

Subject, 669 a.a., transketolase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  432 bits (1110), Expect = e-125
 Identities = 276/683 (40%), Positives = 380/683 (55%), Gaps = 40/683 (5%)

Query: 17  MNRKQLANAIRALSMDGVQKANSGHPGAPMGMADIAEVLWRSHLNHNPQNPNWADRDRFV 76
           MNR   A+ IR L+   V+KANSGHPG  MG AD   VL+   L ++P+NP W  RDRF 
Sbjct: 7   MNRA--ADNIRILAASMVEKANSGHPGGAMGGADFVNVLFSEFLVYDPENPRWEGRDRFF 64

Query: 77  LSNGHGSMLIYSLLHLSGYELSIDDLKNFRQLHSKTPGHPEYGYAPGIETTTGPLGQGIT 136
           L  GH S ++YS L L+G + ++D+LK FRQ  S TPGHPE     GIE T+GPLGQG T
Sbjct: 65  LDPGHMSPMLYSTLALTG-KFTLDELKEFRQWGSPTPGHPEVDIMRGIENTSGPLGQGHT 123

Query: 137 NAVGMAIAEKALAAQFNKPGHDIVDHFTYVFMGDGCLMEGISHEACSLAGTLGLGKLIAF 196
            AVG AIA K L A+FN    ++++   Y ++ DG + E IS  A  +AG LGL  LI F
Sbjct: 124 FAVGAAIAAKFLKARFN----EVMNQTIYAYISDGGIQEEISQGAGRIAGALGLDNLIMF 179

Query: 197 WDDNGISIDGHVEGWFSDDTPKRFEAYGWHVIPAVDGHDADAINAAIEAAKAETSRPTLI 256
           +D N I +    +    +DT  ++EA+GW+V+ +++G+D D I AAI+ A+ E  RPTLI
Sbjct: 180 YDSNDIQLSTETKDVTVEDTAMKYEAWGWNVL-SINGNDPDEIRAAIKEAQTEKERPTLI 238

Query: 257 CTKTIIGFGSPNKAGSH---DC--HGAPLGNDE-IKAAREFLGWEYAPFEIPTDIYAAWD 310
             KT++G G+    GS    +C  HGAPLG D  +   +   G    PF I  ++   + 
Sbjct: 239 IGKTVMGKGARKADGSSYEANCATHGAPLGGDAYVNTIKNLGGDPVNPFVIFPEVAELY- 297

Query: 311 AKQAGASKEAAWDE--KFAAYAKAYPAEAAEYKRRVAGELP-ANWEAATSEIIANLQANP 367
           AK+A   K+   +   K A + KA P  AA+ +   +G+ P  +W A   +         
Sbjct: 298 AKRAAELKKIVAERYAKKAKWTKANPELAAKLEAFFSGKAPKVDWAAIEQK--------- 348

Query: 368 ANIASRKASQNALEAFGKLLPEFMGGSADLAPSNLT--MWSGSKSLTAEDASGNYIHYGV 425
           A  A+R AS   L A    +   +  SADL+ S+ T      + S    D SG +   GV
Sbjct: 349 AGTATRAASATVLGALAMQVENMIVASADLSNSDKTDGFLKKTHSFKKGDFSGAFFQAGV 408

Query: 426 REFGMTAIINGIALHGGFVPYGATFLMFMEYARNAMRMAALMKVQNIQVYTHDSIGLGED 485
            E  M  I  G++LHGG +    TF +F +Y + A+RMAALM+     ++THD+  +GED
Sbjct: 409 SELSMACICIGMSLHGGVIAACGTFFVFSDYMKPAVRMAALMEQPVKFIWTHDAFRVGED 468

Query: 486 GPTHQPVEQIASLRMTP---------NMSTWRPCDQVESAVAWKLAIERKDAPSALIFSR 536
           GPTH+PVEQ A +R+           +M   RP D  E+ +AWKLA+E    P+ LIFSR
Sbjct: 469 GPTHEPVEQEAQIRLMEKLKNHKGHNSMLVLRPADAEETTIAWKLAMENMSTPTGLIFSR 528

Query: 537 QNLAQQPRSAEQVANIAKGGYILKDCAGQPELILIATGSEVELAVAAYEQLSAEGKAVRV 596
           QN+A  P   +     AKG YI+      P++IL+A+GSEV   VA  E L  +G  VR+
Sbjct: 529 QNIANLPAGTD-YEQAAKGAYIVAGSDENPDVILVASGSEVSTLVAGTELLRKDGVKVRI 587

Query: 597 VSMPSTDAFDKQDAAYREAVLPAAVTKRIAIEAGIADFWYKYVGFGGRIIGMTSFGESAP 656
           VS PS   F  Q   Y+E+VLPA   K   + AG+       VG  G++ G+ SFG SAP
Sbjct: 588 VSAPSEGLFRSQSKEYQESVLPAD-AKIFGLTAGLPVTLQGLVGCHGKVWGLESFGFSAP 646

Query: 657 AGELFKLFGFTTENVVKQAKELL 679
              L +  GFT ENV  Q K ++
Sbjct: 647 YTVLDEKLGFTAENVYNQVKAMI 669