Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., transcriptional regulator, DeoR family from Pseudomonas syringae pv. syringae B728a

 Score =  339 bits (870), Expect = 5e-98
 Identities = 171/322 (53%), Positives = 230/322 (71%), Gaps = 1/322 (0%)

Query: 1   MSQIPEISVESTDLLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITV 60
           MS   +      DL+TE+A+ YY +  TQE I+K++ +SRAKV RLLK+ARDEGIVE+ V
Sbjct: 12  MSDSTQRMASDIDLMTEVAMLYYLENVTQEAIAKRFDLSRAKVSRLLKRARDEGIVEVRV 71

Query: 61  KYHPVFSAKIEQRLIERFGVRRALIALDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTVG 120
             HP  + ++E  L+ERF + RALIA+D  + + QR  VA LV+NYL  TL +GM+V VG
Sbjct: 72  LQHPAMNNELELALVERFQLDRALIAVDHSDPDTQRSAVASLVANYLNKTLGDGMIVAVG 131

Query: 121 QGRNVSAVAHHVGVITPRDCKFVCSIGGIHPRGGMFNADHICRQLAKKYGGSSETLYAPA 180
            GRNV AVA +V +   R+C FVC+IGG    G   N DHICR+LA ++GG SE+LYAPA
Sbjct: 132 MGRNVGAVADNVFLPVTRNCTFVCAIGGSLKAGEYMNPDHICRRLALRFGGESESLYAPA 191

Query: 181 YAENPEQKRVFMQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEVVQSRLN 240
              NPE + + + N TV+ TLD AR+AD+AL+GIGDMSENS MV +GWF+P+E+ Q+RL+
Sbjct: 192 LVANPELRSILISNDTVRSTLDRARRADMALIGIGDMSENSNMVRMGWFSPQEIAQARLS 251

Query: 241 QGVVGDFAGHDFFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALR 300
            G VGD  G+DF D+HG+ A   +  RVIGL + E   I +V+AIA+EN+K  A LGALR
Sbjct: 252 -GTVGDMMGYDFIDIHGQPAVNAIQGRVIGLTVQELFRIPDVVAIASENTKAAATLGALR 310

Query: 301 TGAIDVIATSVSNALTVLNLDE 322
           +G I+ +AT+V+NA T+L LD+
Sbjct: 311 SGVINTLATTVTNAHTILALDD 332