Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  100 bits (248), Expect = 6e-26
 Identities = 84/314 (26%), Positives = 137/314 (43%), Gaps = 9/314 (2%)

Query: 14  LLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVKYHPVFSAKIEQR 73
           L+ + A  Y+ +G TQ EI ++  ++R +V  LL  A ++GIV I+     V S ++E R
Sbjct: 6   LMAKAAWLYHVEGLTQAEIGERMNLTRRRVNELLAAALEQGIVRISFSSPLVESVELESR 65

Query: 74  LIERFGVRRALIALDQPNDEAQRQQVAGL-VSNYLTSTL--KNGMVVTVGQGRNVSAVAH 130
           L +RFG+  A++ +  P D      V G   + YL   +  +    + VG G  +     
Sbjct: 66  LRDRFGLDDAVV-MPAPADPRLLHAVIGRGAAAYLDRLIQTRKPHSIGVGWGATLRETMQ 124

Query: 131 HVGVITPRDCKFVCSIGGIHPRGGMFNADHICRQLAKKYGGSSETLYAPAYAENPEQKRV 190
           H+             +GG+   G   N   I R  A+          AP YAE P+ +  
Sbjct: 125 HMTPANEPRIDVRSMMGGL-THGSEINTFEIVRGFAEVLKAQCHYFVAPIYAETPQSREA 183

Query: 191 FMQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEV-VQSRLNQGVVGDFAG 249
            +  S  ++T       DI+ +  GDMS++S  V  G   PE   V   + +G VGD  G
Sbjct: 184 LIAQSVFRKTFRQICDVDISYLSAGDMSQHSLQVRYG--LPEGTKVSELIARGAVGDLLG 241

Query: 250 HDFFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTGAIDVIAT 309
             + D  G   +  +N +V+    D++R I   I  +  + K   LL   R     ++ T
Sbjct: 242 R-YIDAKGNPVDHPLNRQVLSPEFDDYRRIPCRIIASGGSHKHGILLALARARLPTILIT 300

Query: 310 SVSNALTVLNLDEQ 323
               A+ +L   E+
Sbjct: 301 DAETAMAMLQRAEE 314