Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 1e-32
 Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 12/311 (3%)

Query: 13  DLLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVKYHPVFSAKIEQ 72
           ++LT IA  YY DG TQ EI +K  +SR KV RLL+  R  GI+++ +         +E+
Sbjct: 16  EILTRIAWYYYNDGLTQNEIGEKLNMSRIKVSRLLESGRRSGIIQVRINSRYQGCLALER 75

Query: 73  RLIERFGVRRALIALDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTVGQGRNVSAVAHHV 132
           R+ ER+G+  A +    P D+    ++    + +L   L+   ++ VG G  VS     +
Sbjct: 76  RIKERYGLLEAYVVPQLP-DQDPSDRLGQAAAQFLMQRLQPDDLLAVGWGATVSNTIQRL 134

Query: 133 G-VITPRDCKFVCSIGGIHPRGGMFNADHICRQLAKKYGGSSETLYAPAYAENPEQKRVF 191
           G V   R+   V   GG+          ++       +G S   + AP    +P+  R  
Sbjct: 135 GHVANERNIGLVSLTGGV--------GTYVDGMRTANWGSSVHLVPAPLVVRDPDVARNL 186

Query: 192 MQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEVVQSRLNQGVVGDFAGHD 251
                V   L++A  A   LVGIG++S  S +V  G+ +P+EV   R  +G VGD     
Sbjct: 187 SSEPAVANLLEMALNASYQLVGIGELSATSTVVRSGYVSPDEVEPLR-RKGAVGDIL-CQ 244

Query: 252 FFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTGAIDVIATSV 311
           F++  G      ++DRVIG+ +       +V+A A    K  A+  AL    + ++ T  
Sbjct: 245 FYNECGEPLELPLHDRVIGVKLAALSRAEKVVAAAGGIHKVQAIHAALCGKVVGILITDE 304

Query: 312 SNALTVLNLDE 322
           + A  ++ L++
Sbjct: 305 TTASRLIELED 315