Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  115 bits (287), Expect = 2e-30
 Identities = 82/308 (26%), Positives = 151/308 (49%), Gaps = 9/308 (2%)

Query: 20  VSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVKYHPVFSAKIEQRLIERFG 79
           V ++ +G TQ +I+ +  IS A V RL+K+ R  G+VEI +K       +IE++L+   G
Sbjct: 27  VLHFLEGMTQAQIADQLGISHATVNRLIKRGRQLGLVEIKIKSPVEPLVEIEEQLLALGG 86

Query: 80  VRRALIA-LDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTVGQGRNVSAVAHHVGVITPR 138
           +RRA++      N +   Q V    +  +   + +G  + +  G+ VSAV   +      
Sbjct: 87  IRRAVVVPTVSDNPQIALQSVGEAAARLMLEQISDGDTICITGGKGVSAVVAGLQPSRRF 146

Query: 139 DCKFVCSIGGIHPRGGMFNADHICRQLAKKYGGSSETLYAPAYAENPEQKRVFMQNSTVK 198
           D + + + G +  +    + +H+   +A + GG S  ++AP +A++  ++++ +   +V 
Sbjct: 147 DIEVIPATGCVQGK-HYTDVNHVSTLMADRLGGHSFQIHAPLFADSEAERKMLLGMRSVA 205

Query: 199 QTLDLARKADIALVGIGD-MSENSYMVDL--GWFTPEEVVQSRLNQGVVGDFAGHDFFDV 255
                AR A IA+VGIG  +S++S   DL     T  E ++     G   +   H   D 
Sbjct: 206 DVFKRARDAKIAVVGIGSILSDDSSYYDLHPSSSTDREAIE---QSGASCELLAH-LLDD 261

Query: 256 HGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTGAIDVIATSVSNAL 315
           HGR+    +N R++ L + EF  I   I +A+  SK   +L  +R   +D + T  +   
Sbjct: 262 HGRVCGYGLNRRLVSLTLSEFASIPTKIGVASGPSKAGPILSVMRGNHLDTLVTDQATGA 321

Query: 316 TVLNLDEQ 323
            +L L ++
Sbjct: 322 RILELAKE 329