Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., Transcriptional Regulator, DeoR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  323 bits (828), Expect = 4e-93
 Identities = 167/323 (51%), Positives = 226/323 (69%), Gaps = 5/323 (1%)

Query: 4   IPEISVESTD----LLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEIT 59
           + E++ +S D    LLTEIA  Y+ +  TQEE++K++ +SRAK+GRLLK+AR+EGIVEIT
Sbjct: 31  VTEMTTDSRDAERHLLTEIAALYFLEQVTQEELAKRFAMSRAKIGRLLKRAREEGIVEIT 90

Query: 60  VKYHPVFSAKIEQRLIERFGVRRALIALDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTV 119
           V+ HP   +++E+   +RFG+ R LI+ D  + + QR  VA LV+ YL   L +GM+V V
Sbjct: 91  VRPHPSAVSEMEEEFRQRFGLSRLLISTDHRDPDTQRSAVASLVAAYLNRVLDDGMIVAV 150

Query: 120 GQGRNVSAVAHHVGVITPRDCKFVCSIGGIHPRGGMFNADHICRQLAKKYGGSSETLYAP 179
           G GRNV AVA ++    PR   FV +IGG    GG  N DHICR+LA ++GG SETLYAP
Sbjct: 151 GMGRNVGAVADNITSPAPRAVTFVSAIGGSMRAGGYMNPDHICRRLAARFGGESETLYAP 210

Query: 180 AYAENPEQKRVFMQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEVVQSRL 239
           A   NPE K   +   TVK TLD AR+AD+AL+G+GD+SE+S MV +GWF+P EV ++RL
Sbjct: 211 ALVANPELKAALIGQDTVKHTLDRARRADLALIGVGDVSEDSNMVRMGWFSPSEVAEARL 270

Query: 240 NQGVVGDFAGHDFFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGAL 299
           + G +GD  G+DF D+ GR +NT M  R+IGL + E   I +VIAIA+E +K   +LGAL
Sbjct: 271 S-GTIGDMMGYDFIDIEGRPSNTAMQGRIIGLTMAELCRIPDVIAIASETTKAAGILGAL 329

Query: 300 RTGAIDVIATSVSNALTVLNLDE 322
           RTG I+ +ATS SNA TV +LD+
Sbjct: 330 RTGTINTLATSTSNAHTVRSLDD 352