Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., LsrR family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  100 bits (250), Expect = 4e-26
 Identities = 81/327 (24%), Positives = 154/327 (47%), Gaps = 23/327 (7%)

Query: 2   SQIPEISVESTDLLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVK 61
           S+   +++   +L+  +A  YY DG TQ +I ++  + R K+ RLL++ R  G++ + + 
Sbjct: 10  SRYAGLALAEEELVARVAWCYYHDGLTQNDIGERLGLPRLKISRLLEKGRQSGVIRVQIN 69

Query: 62  YHPVFSAKIEQRLIERFGVR--RALIALDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTV 119
                   +E  L +RFG++  R L AL+ P       ++    +  L   L+ G ++ V
Sbjct: 70  SRYEGCLALETELQQRFGLKIARVLPALNTP---PMNTRLGIGAAQSLMGVLEPGQLLAV 126

Query: 120 GQGR-NVSAVAHHVGVITPRDCKFVCSIGGIHP-RGGMFNADHICRQLAKKYGGSSETLY 177
           G G   +S + H  G I  +  + V   GG+ P   G+   D  C         S   + 
Sbjct: 127 GFGEATMSCLQHLSGFIGSQQVRLVTLSGGVGPYMTGIGQLDAAC---------SVSMIP 177

Query: 178 APAYAENPEQKRVFMQNSTVKQTLDLARKADIALVGIG--DMSENSYMVDLGWFTP-EEV 234
           AP    + +   +  + ++V+  +  A  AD A+VGIG  D   ++ ++  G+ +  E++
Sbjct: 178 APLRVSSADVAEILRREASVRDVILAATAADAAVVGIGAIDQRRDATILRSGYISEGEQL 237

Query: 235 VQSRLNQGVVGDFAGHDFFDVHGR-IANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPL 293
           + +R  +G VGD  G+ F    G+ +    ++  ++G+ +DE   +  ++ +A    K  
Sbjct: 238 MYAR--KGAVGDILGY-FLQADGKPVEGLEIHRELLGVTLDELAQLPTIVGVAGGEEKAQ 294

Query: 294 ALLGALRTGAIDVIATSVSNALTVLNL 320
           A+  AL    I+ + T  + A  VL L
Sbjct: 295 AIYAALIGKRINGLVTEETTARAVLTL 321