Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., Cro/Cl family transcriptional regulator from Klebsiella michiganensis M5al

 Score = 90.5 bits (223), Expect = 5e-23
 Identities = 80/310 (25%), Positives = 140/310 (45%), Gaps = 9/310 (2%)

Query: 14  LLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVKYHPVFSAKIEQR 73
           L+ +IA  YY+   TQ +I+++  I R  + RLLK+ R++GIV I + Y    +  +EQ+
Sbjct: 9   LIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQ 68

Query: 74  LIERFGVRRALIAL-DQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTVGQGRNVSAVAHHV 132
           L ++F ++  ++A  D   +E Q   +    +  +   L+ G +V    GR V A+  ++
Sbjct: 69  LKQKFALKEVVVAASDALQEEEQLNLIGQHGAQLVDRLLEPGDIVGFSWGRAVRALVENL 128

Query: 133 GVI-TPRDCKFVCSIGGIHPRGGM---FNADHICRQLAKKYGGSSETLYAPAYAENPEQK 188
                 R    V  IGG  P G +   ++ + +    A K    S     PA  +N   +
Sbjct: 129 PQAGQSRQVICVPIIGG--PSGKLESRYHVNTLTYGAAAKLKAESHLADFPALLDNKLIR 186

Query: 189 RVFMQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEVVQSRLNQGVVGDFA 248
              MQ+   K         D+ALVGIG  +         ++  EE       Q V GD  
Sbjct: 187 NGIMQSQHFKTIASYWDNLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARQ-VAGDIC 245

Query: 249 GHDFFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTGAIDVIA 308
              F+++ G +  T M+++ + + + + R     + IA    K   +LGAL    I+ + 
Sbjct: 246 SR-FYNIDGLMVETAMSEKTLSIEMAKLRQARYSVGIAMGAEKYSGILGALNGHYINCLV 304

Query: 309 TSVSNALTVL 318
           T+   A ++L
Sbjct: 305 TNRETAESLL 314