Pairwise Alignments

Query, 331 a.a., DNA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., transcriptional regulator, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  118 bits (296), Expect = 2e-31
 Identities = 92/307 (29%), Positives = 143/307 (46%), Gaps = 11/307 (3%)

Query: 14  LLTEIAVSYYQDGATQEEISKKYTISRAKVGRLLKQARDEGIVEITVKYHPVFSAKIEQR 73
           LL+ IA +YY +G TQ +I+     SR +V R+L+  RDEG V+I V        + E+ 
Sbjct: 10  LLSRIAWAYYVNGMTQSDIASWLGTSRVRVNRMLQVCRDEGYVQIMVHSGKAACFEAEKA 69

Query: 74  LIERFGVRRALIALDQPNDEAQRQQVAGLVSNYLTSTLKNGMVVTVGQGRNVSAVAHHVG 133
           + +RFG+RRA++    P      + +      YL   LKNG  V +G     S       
Sbjct: 70  MEDRFGLRRAIVIPTPPTPRQLNRNLGHAAGYYLAGILKNGTSVGMGYAAAASIPR---- 125

Query: 134 VITPRDCKFVCSIGGIHPRGGMFNADHICRQLAKKYGGSSETLY--APAYAENPEQKRVF 191
              P +   V S+ G  P   + N   I   +A++   + +T Y  AP +A  PE  R+ 
Sbjct: 126 --KPAEHLTVVSLYGGLPHSIVINPYEIVTTIARRV-QAEQTFYIAAPMFAPTPETCRLL 182

Query: 192 MQNSTVKQTLDLARKADIALVGIGDMSENSYMVDLGWFTPEEVVQSRLNQGVVGDFAGHD 251
              +  K     A + D+AL+G+G+++ ++  V LG  + ++ V+S    G VG+  G  
Sbjct: 183 KSQALFKAVYARALQVDVALIGLGELAPDATNVQLGAISHDD-VESLERAGAVGEVFG-T 240

Query: 252 FFDVHGRIANTVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTGAIDVIATSV 311
           F D  G       N+  +G  ++E R I   IA A    K   +  AL  G IDV+ T  
Sbjct: 241 FVDAEGVPVLHPRNECFMGPDLEEVRAIPHSIAAAGGVKKTGIIRAALSGGFIDVLVTDE 300

Query: 312 SNALTVL 318
             A  +L
Sbjct: 301 ETATRLL 307