Pairwise Alignments

Query, 394 a.a., peptide-methionine (R)-S-oxide reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., protein-methionine-S-oxide reductase, PilB family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  132 bits (331), Expect = 2e-35
 Identities = 57/143 (39%), Positives = 88/143 (61%)

Query: 58  ATLAGGCFWCTESDMEKLPGVVDVISGYAGGDVDNPTYKQVSSGKTGHIEVIQVTFDPKI 117
           AT   GCFWC E+  + L GV++V SGY+GG+  +  YK V SG+TGH EV+ + FDP+ 
Sbjct: 130 ATFGAGCFWCVEAIFKSLKGVLNVRSGYSGGEASDADYKSVCSGQTGHAEVVHIEFDPEQ 189

Query: 118 VTYEQVLDNFFRHIDPTDDQGSFVDRGEQYRPAIFYHNAEQLEVAKRFMMEIDQLGIFKK 177
           + +  +L   F   DPT       D+G QYR  +F H+A Q++ A   + ++ +  +F  
Sbjct: 190 IAFTTLLQVLFESHDPTTLNRQGNDKGPQYRSVVFAHDATQVDEANAMIAKLTEARVFDA 249

Query: 178 PLKTELIEFKKFWPAEDYHQDYY 200
           P+ T+++ F+ F+PAE YH DY+
Sbjct: 250 PIVTQVVAFESFYPAEAYHNDYF 272



 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 262 KLTSLQYKVTQRDGTERPFDNEYWDNKEEGIYVDIVSGEPLFSSTDKYDSKTGWPSFTQP 321
           KLT  +  V +  GTERPF  +Y+ +  +G+Y+      PL+ S DK+++  GWP+F   
Sbjct: 3   KLTDFERYVIEEKGTERPFSGQYYQHDAKGVYLCKKCHTPLYRSEDKFNAHCGWPAFDDE 62

Query: 322 LNSSYIVTKDDNSLFYTRTEVRSRFADSHLGHVF-NDGPAPTGLRYCMNSAAMRFIPKQE 380
           +  +     D +     RTE+       HLGHVF  +   P  +R+C+NS +M F  + E
Sbjct: 63  IPGAVSRHIDADG---RRTEIVCSQCGGHLGHVFEGEFLTPKNIRHCVNSVSMLFKAQDE 119