Pairwise Alignments

Query, 394 a.a., peptide-methionine (R)-S-oxide reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., peptide methionine sulfoxide reductase msrA/msrB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  265 bits (676), Expect = 2e-75
 Identities = 144/335 (42%), Positives = 191/335 (57%), Gaps = 25/335 (7%)

Query: 61  AGGCFWCTESDMEKLPGVVDVISGYAGGDVDNPTYKQVSSGKTGHIEVIQVTFDPKIVTY 120
           AGGCFW TE  ++++ GV     GYA   V NP+Y+QV SGKT   E ++V +DP+ V  
Sbjct: 32  AGGCFWGTEHFLKQIRGVESTQVGYANSTVANPSYEQVCSGKTNAAETVKVVYDPEEVNL 91

Query: 121 EQVLDNFFRHIDPTDDQGSFVDRGEQYRPAIFYHNAEQLEVAKRFMMEIDQLGIFKKPLK 180
             +L+ +F+ IDPT       DRG QYR  I+Y N   L    + +  +     + KP+ 
Sbjct: 92  SLLLNLYFQTIDPTSLNRQGNDRGTQYRTGIYYINKADLSTINQAIQALATQ--YNKPIA 149

Query: 181 TELIEFKKFWPAEDYHQDYYKKNKVRYNYYRYASGRDQYLDEIFGADRNTHPKTLRQWID 240
            E+     F+PAE YHQDY  KN   Y +   A      L E+        P T +    
Sbjct: 150 VEVEPLTNFYPAEVYHQDYLDKNPGGYCHINLA------LFEMARKANAPKPPTFQ---- 199

Query: 241 EKNGQANVKAYVRPSDEQIRAKLTSLQYKVTQRDGTERPFDNEYWDNKEEGIYVDIVSGE 300
                       +P D  +R KL++ QY VTQ++ TE  F NE+W+    GIYVDI +GE
Sbjct: 200 ------------KPDDATLRKKLSAEQYAVTQKNATEPAFHNEFWNEHRPGIYVDITTGE 247

Query: 301 PLFSSTDKYDSKTGWPSFTQPLNSSYIVTKDDNSLFYTRTEVRSRFADSHLGHVFNDGPA 360
           PLF STDK+DS  GWPSF++P+    I  K D +    RTEVRS+  D+HLGHVF DGP 
Sbjct: 248 PLFVSTDKFDSGCGWPSFSKPIQKELIAEKKDTTHGMIRTEVRSKTGDAHLGHVFTDGPK 307

Query: 361 PT-GLRYCMNSAAMRFIPKQEMAAQGYGEYLALFK 394
              GLRYC+NSA++RFIPK++M  +GYGEYL L K
Sbjct: 308 DKGGLRYCINSASLRFIPKEKMKEEGYGEYLPLIK 342