Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

 Score = 77.0 bits (188), Expect = 9e-19
 Identities = 63/264 (23%), Positives = 122/264 (46%), Gaps = 18/264 (6%)

Query: 53  LLILLSLMLLFIVAPLAAMLLKSVQNGQG-----EFVGLAYFAQYFSSAALWQSLRNTLV 107
           L IL +L+LLF++ P+  ++  S  +G       +   + ++   FSSA   +SL+N+++
Sbjct: 17  LRILCALVLLFLIVPVLVIVPLSFNSGSFLVYPLQGFSMRWYEALFSSADWMRSLKNSML 76

Query: 108 LGISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQGML 167
           +  + T +  +L    A  LTR+   GK L   +  +P++ P ++  ++    F   GM 
Sbjct: 77  IAPAATFLAVVLGTLAAVGLTRAEFRGKALLMTILISPMVVPVVIIGVASYLFFAPLGMG 136

Query: 168 KSWLGGESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPIKTFFIV 227
            S+L    ++  LG+         P  ++ ++ +L   +  L  AA +L  SP+  FF V
Sbjct: 137 NSYLSLILVHAVLGV---------PFVIITVSATLQGFNYNLVRAAASLGASPLTAFFRV 187

Query: 228 TLPAAKYGLISALIVVFTLVVCDFGVPKVIGGSYNV-LATDIFKQVVGQQNFAMGAVTSI 286
           TLP    G+IS  +  F     +  V   + G   + L   +F  +  ++N +     + 
Sbjct: 188 TLPLIAPGVISGALFAFATSFDEVVVTLFLAGPEQITLPRQMFSGI--RENLSPTIAAAA 245

Query: 287 VLLLPAVFAFIAD-RWVQKKQQSL 309
            LL+    A +    W++ + + L
Sbjct: 246 TLLIGFSIALLLTLEWLRGRAEKL 269



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 11/245 (4%)

Query: 328 LCLLYCVLICVAIVAVLATAVYGSLVTFWPWNTALTLKHYQFAETSAYGWSPYFNSLTLA 387
           LC L  + + V ++ ++  +        +P     +++ Y+   +SA       NS+ +A
Sbjct: 20  LCALVLLFLIVPVLVIVPLSFNSGSFLVYPLQ-GFSMRWYEALFSSADWMRSLKNSMLIA 78

Query: 388 SLTALCGTVIIFLGAYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGYIFFFNHASNP 447
                   V+  L A  + +       +  +  + + PM VP +++G+    FF     P
Sbjct: 79  PAATFLAVVLGTLAAVGLTRAEFRG--KALLMTILISPMVVPVVIIGVASYLFFA----P 132

Query: 448 LNGLYGGMLLLVINTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWKVTLPV 507
           L G+    L L++   V       +T    L+     L   AAS+        ++VTLP+
Sbjct: 133 L-GMGNSYLSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLTAFFRVTLPL 191

Query: 508 SLPAVLDIASYLFINALTTTSAVVFLYSTD--TVPASVAVLNMDDAGQTGAAAAMAVMIM 565
             P V+  A + F  +       +FL   +  T+P  +     ++   T AAAA  ++I 
Sbjct: 192 IAPGVISGALFAFATSFDEVVVTLFLAGPEQITLPRQMFSGIRENLSPTIAAAA-TLLIG 250

Query: 566 LSAAL 570
            S AL
Sbjct: 251 FSIAL 255