Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella amazonensis SB2B

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 48/193 (24%), Positives = 102/193 (52%), Gaps = 11/193 (5%)

Query: 108 LGISVTAIVGILAFGY--AYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQG 165
           L I+V + +G L  GY  AYA+ R+ +  + +  +L   P     L+   + + L  + G
Sbjct: 89  LKIAVVSTLGCLLLGYPMAYAIARAPVKMQTVLLLLIMLPSWTSFLIRVYAWMGLLADTG 148

Query: 166 MLKS---WLGG-----ESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALK 217
           ++ +   WLG      + +   + + +G+++   P  ++ L  +L   D  L EAA  L 
Sbjct: 149 LINNVLLWLGAIDEPLKILNTNIAVYIGIVYAYLPFMVLPLYANLVKMDMSLLEAAADLG 208

Query: 218 TSPIKTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVIGGSYNVLATDI-FKQVVGQQ 276
           +  I TF+ +TLP +K G+I+  ++VF   V +F +P+++GG  +++   + +++    +
Sbjct: 209 SRSINTFWNITLPLSKGGVIAGSMLVFIPSVGEFVIPELLGGPDSLMIGKVLWQEFFNNR 268

Query: 277 NFAMGAVTSIVLL 289
           ++ + +  +IV+L
Sbjct: 269 DWPVASALAIVML 281



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 16/176 (9%)

Query: 359 NTALTLKHYQFAETSAYGWSPYFNSLTLASLTALCGTVIIFLGAYSIEKGRVFALLRQAM 418
           N AL L +Y      A  ++ Y  SL +A ++ L   ++ +  AY+I +  V   ++  +
Sbjct: 64  NVALNLGNYLLLLDDALYYTAYLGSLKIAVVSTLGCLLLGYPMAYAIARAPV--KMQTVL 121

Query: 419 QMLSMVPM---------AVPGLVLGLGYI----FFFNHASNPLNGLYGGMLLLVINTVVH 465
            +L M+P          A  GL+   G I     +      PL  +    + + I  V  
Sbjct: 122 LLLIMLPSWTSFLIRVYAWMGLLADTGLINNVLLWLGAIDEPLK-ILNTNIAVYIGIVYA 180

Query: 466 YYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWKVTLPVSLPAVLDIASYLFI 521
           Y     +     L ++   L   AA +        W +TLP+S   V+  +  +FI
Sbjct: 181 YLPFMVLPLYANLVKMDMSLLEAAADLGSRSINTFWNITLPLSKGGVIAGSMLVFI 236