Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 50/193 (25%), Positives = 100/193 (51%), Gaps = 11/193 (5%)

Query: 108 LGISVTAIVGILAFGY--AYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQG 165
           L ++    +G L  GY  AYA+ R+    + +  +L   P     L+   + + +  N G
Sbjct: 87  LKMACVTTIGCLLIGYPMAYAIARAPKQHQTVLILLVMLPSWTSFLIRVYAWMGILSNNG 146

Query: 166 MLKS---WLGGES-----IYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALK 217
           ++ +   WLG  S     +     + +G+I+   P  ++ L  +LS  D  L EAA  L 
Sbjct: 147 VINNLLMWLGVISEPIQMLNTNFAVYIGIIYTYLPFMILPLYANLSQLDGSLLEAAADLG 206

Query: 218 TSPIKTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVIGGSYNVLATDI-FKQVVGQQ 276
           +  + TF+ VTLP +K G+I+  ++VF  VV +F +P+++GG  +++   + +++    +
Sbjct: 207 SRSLNTFWKVTLPLSKGGVIAGSMLVFIPVVGEFVIPELLGGPDSLMIGKVLWQEFFNNR 266

Query: 277 NFAMGAVTSIVLL 289
           ++ + +  +IV+L
Sbjct: 267 DWPVASSLAIVML 279



 Score = 27.7 bits (60), Expect = 7e-04
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 24/159 (15%)

Query: 380 YFNSLTLASLTALCGTVIIFLGAYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGYIF 439
           Y  SL +A +T +   +I +  AY+I   R     +  + +L M+P     L+    ++ 
Sbjct: 83  YLGSLKMACVTTIGCLLIGYPMAYAI--ARAPKQHQTVLILLVMLPSWTSFLIRVYAWMG 140

Query: 440 FFNHASNPLNGLYGGMLL-----------------LVINTVVHYYTVGHMTAVTALKQLP 482
             ++     NG+   +L+                 + I  +  Y     +     L QL 
Sbjct: 141 ILSN-----NGVINNLLMWLGVISEPIQMLNTNFAVYIGIIYTYLPFMILPLYANLSQLD 195

Query: 483 PELEATAASIKLPQYRLLWKVTLPVSLPAVLDIASYLFI 521
             L   AA +        WKVTLP+S   V+  +  +FI
Sbjct: 196 GSLLEAAADLGSRSLNTFWKVTLPLSKGGVIAGSMLVFI 234