Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 25/252 (9%)

Query: 52  TLLILLSLMLLFIVAPLAAMLLKSVQNGQGEFVGLAYFAQYFSSAALWQSLRNT-LVLGI 110
           T L+ LS+  L +V P    +L S+ N +           Y    +L+ SL +T +VLG 
Sbjct: 18  TFLLFLSISSLILV-PKFEDVLSSIFNPE---------MIYSLKVSLYSSLISTGIVLGF 67

Query: 111 SVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQ--GMLK 168
           S+            YA++R   PGK + + +   PI  P L+  ++L+ LFG    G + 
Sbjct: 68  SIPT---------GYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFGQTFIGDIL 118

Query: 169 SWLGGESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPIKTFFIVT 228
            + G + ++  LGI +  IF   P+A+ I+ ++    + R    +R+L  S  +TF  VT
Sbjct: 119 EFFGIKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVT 178

Query: 229 LPAAKYGLISALIVVFTLVVCDFG-VPKVIGGSYNVLATDIFKQVVGQQ--NFAMGAVTS 285
           LP A+ G+ ++ I+ F   +  FG V  + GG+Y    T      +     N  M   + 
Sbjct: 179 LPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSG 238

Query: 286 IVLLLPAVFAFI 297
           IVLL+ +  A +
Sbjct: 239 IVLLMISFIAIL 250



 Score = 41.2 bits (95), Expect = 5e-08
 Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 29/221 (13%)

Query: 383 SLTLASLTALCGTVIIFLGAYSIEKGRVFALLRQAMQMLSMV------PMAVPGLVLGLG 436
           SL ++  ++L  T I+    +SI  G  +A+ R +    S+V      P+A P LVLGL 
Sbjct: 49  SLKVSLYSSLISTGIVL--GFSIPTG--YAISRYSFPGKSIVKAILDLPIAFPELVLGLA 104

Query: 437 YIFFFNHA-SNPLNGLYG--------GMLLLVINTVVHYYTVGHMTAVTALKQLPPELEA 487
            +  F       +   +G        G+++  I T + Y         +  + + P  E 
Sbjct: 105 LLLLFGQTFIGDILEFFGIKVVFTKLGIVVAQIFTALPY---AIRIVCSTFQDINPRYEL 161

Query: 488 TAASIKLPQYRLLWKVTLPVSLPAVLDIASYLFINALTTTSAVVFLYS-----TDTVPAS 542
            + S+   ++     VTLP++   +   +   F   + T   V+ L       T+T+P +
Sbjct: 162 VSRSLGYSEFETFKNVTLPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPIT 221

Query: 543 VAVLNMDDAGQTGAAAAMAVMIMLSAALAKLLHVGLEFGLF 583
           +  LNM   G  G A +  +++++ + +A L+    E G F
Sbjct: 222 L-YLNM-SYGNLGMAISSGIVLLMISFIAILIFEKYEGGKF 260