Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  169 bits (428), Expect = 3e-46
 Identities = 136/528 (25%), Positives = 255/528 (48%), Gaps = 24/528 (4%)

Query: 48  ILSTTLLILLSLMLL-FIVAPLAAMLLKSVQNGQGEFVGLAYFAQYFSSAALWQSLRNTL 106
           IL     IL ++ LL FI+ P+  + L+S     G    L  ++++ S +  +  L+N++
Sbjct: 17  ILENGFYILANVFLLIFIMYPVFTVFLQSFYGSNG--FTLDAYSKFISDSYYFGILKNSI 74

Query: 107 VLGISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQGM 166
           V+    T I   L F ++  + ++    K+ F++    PI+ P  + +++ +FLFG  G 
Sbjct: 75  VVACFSTIISIFLGFIFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGA 134

Query: 167 LKSWLGG--ESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPIKTF 224
           +   L G   +IYG   + +         A  I++  L        +AAR L ++  + F
Sbjct: 135 VTYGLLGLEPNIYGWKSVVIMQSIDYTTTAFFIISAVLLGISGEFEDAARNLGSNEFQVF 194

Query: 225 FIVTLPAAKYGLISALIVVFTLVVCDFGVPKVIGGSYNVLATDIFKQVVGQQNFAMGAVT 284
             VTLP    G++SA +++F   + DFG P ++GG++N LAT  + +++G+ N  M +  
Sbjct: 195 KKVTLPLLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIGRYNTQMASTL 254

Query: 285 SIVLLLPAVFAFIADRWVQKKQQSLFDTRSVAYQPAPHRLRDGLCLLYCVLICVAIVAVL 344
           S++LL P++  F    ++  K    ++ +              + L +  +    +  +L
Sbjct: 255 SVILLFPSMALF----YLYSKYHKGYELKKSKLTKYSLSNIQKIILGFPAIFFSILAYLL 310

Query: 345 ATAVY-GSLVTFWPWNTALTLKHYQFAETSAYGWSPYFNSLTLASLTALCGTVIIFLG-- 401
             AV+  S    +  N ALTL +  F E  + G     N+L  A  +++   ++ FLG  
Sbjct: 311 FFAVFVASFTKSFGHNYALTLDY--FFEAISAGQLAIKNTLFYALSSSI---LVAFLGVA 365

Query: 402 -AYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGYIFFFNHASNPLNGLYGGMLLLVI 460
            +Y I +G+ F   R+ M ++  +P A+PG  +GLGY+  FN  + PL  L G   ++++
Sbjct: 366 YSYIIYRGKFFG--RKLMDLVITLPFAIPGTFMGLGYLLAFN--NYPLL-LTGTSSIIIL 420

Query: 461 NTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWKVTLPVSLPAVLDIASYLF 520
           N +V        T  + L Q+   +E  + ++   + +  +KV LP+  PA++    Y F
Sbjct: 421 NCMVRKLPFSFKTGNSVLSQIEESVEEASLNLGASRLKTFYKVVLPLLEPAIIFSMIYTF 480

Query: 521 INALTTTSAVVFLYSTDTVPASVAVLNMDDAGQTGAAAAMAV-MIMLS 567
           I  + +  +++FL + +T   S  V       Q G  A  ++ M++LS
Sbjct: 481 IATIKSLGSIIFLMTANTKVLSAMVFESTINRQLGVGACYSMFMVILS 528