Pairwise Alignments
Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056
Subject, 301 a.a., polyamine ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1
Score = 69.3 bits (168), Expect = 2e-16
Identities = 61/282 (21%), Positives = 129/282 (45%), Gaps = 13/282 (4%)
Query: 20 MRLKEKSMLNVARTFSVRILPHWSRDSLILSTTLLILLSLMLLFIVAPLAAMLLKSVQNG 79
M++K K R +++ W L ++ +SL I P + +
Sbjct: 1 MKIKSKLKWLKGRFWTISFPYAWLLLFFALPFAIVFKISLSTAAIAIPPYEATFQYADDV 60
Query: 80 QGEFVGLAYFAQYFSSAALWQSLRNTLVLGISVTAIVGILAFGY--AYALTRSCMPGKHL 137
F+ L + + + ++L + + T +G L GY AYA+ R+ + +
Sbjct: 61 LNIFLHLGNYLMLLDDPLYYTAYLSSLKMALVST--IGCLIIGYPMAYAIARAPARWQTV 118
Query: 138 FRVLGSAPILAPSLLPAISLIFLFGNQGMLKS---WLGGES-----IYGGLGITLGLIFW 189
+L P L+ + + + N G++ + WLG S + + + +G+I+
Sbjct: 119 LLLLVMLPSWTSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQILNTNIAVYIGIIYA 178
Query: 190 TFPHALMILTTSLSTSDARLYEAARALKTSPIKTFFIVTLPAAKYGLISALIVVFTLVVC 249
P ++ L +L D L EAA L +S I TF+ +T P +K G+I+ ++VF V
Sbjct: 179 YLPFMILPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAVG 238
Query: 250 DFGVPKVIGGSYNVLATDI-FKQVVGQQNFAMGAVTSIVLLL 290
+F +P+++GG +++ + +++ +++ + + +IV+L+
Sbjct: 239 EFVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASSLAIVMLV 280
Score = 31.2 bits (69), Expect = 6e-05
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 16/179 (8%)
Query: 359 NTALTLKHYQFAETSAYGWSPYFNSLTLASLTALCGTVIIFLGAYSIEKGRVFALLRQAM 418
N L L +Y ++ Y +SL +A ++ + +I + AY+I R A + +
Sbjct: 62 NIFLHLGNYLMLLDDPLYYTAYLSSLKMALVSTIGCLIIGYPMAYAI--ARAPARWQTVL 119
Query: 419 QMLSMVPM---------AVPGLVLGLGYI----FFFNHASNPLNGLYGGMLLLVINTVVH 465
+L M+P A G++ G I + S PL + + + I +
Sbjct: 120 LLLVMLPSWTSFLIRVYAWMGILSNTGIINNSLMWLGIISEPLQ-ILNTNIAVYIGIIYA 178
Query: 466 YYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWKVTLPVSLPAVLDIASYLFINAL 524
Y + L +L L A+ + + WK+T P+S V+ + +FI A+
Sbjct: 179 YLPFMILPLYATLVKLDMSLIEAASDLGSSRINTFWKITFPLSKSGVIAGSMLVFIPAV 237