Pairwise Alignments

Query, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., Integral membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score = 85.9 bits (211), Expect = 1e-21
 Identities = 88/292 (30%), Positives = 135/292 (46%), Gaps = 25/292 (8%)

Query: 8   LVLFSALLHAGWNIIGKRYQSSGPSFFLGATSATSLLLTPYIVWYFTKIGWSTLPTQFWL 67
           LVL +ALLHA WN + K    SG    + A   +  LL   +   F  +     P   W 
Sbjct: 6   LVLVAALLHAAWNTLIK---FSGERLLVVACMDSVALLFVALALGFVALP----PLAIWP 58

Query: 68  LLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARGLPVLLVGAGT-VMLGYDLQLNQWLGF 126
            ++ S   +++Y   L  AY   D+G+ YPL RGL  L+V A T +  G  L   Q  G 
Sbjct: 59  WILASAAFELLYRYLLIQAYRVGDLGLVYPLMRGLSPLVVLALTFIFAGEALTTQQIFGI 118

Query: 127 ALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGTAGYSIIDKEALAIIEQTVGSQM 186
            LI  G L +  Q     R   ++ L +V  +   +G   Y+ ID  AL           
Sbjct: 119 LLIPFGMLCLLWQGGGGARL-PWSMLPVVALIGLCIGC--YTFIDGHALRRWSH------ 169

Query: 187 PASYSAVLYLGIQFWAMCIPLAIWYLLTGQRAPFVEAWRIRYTATLA-GLMMGGTYSLVL 245
           P  Y   + L +  W    PL     L G+R  F+  WR ++   LA G  +  +Y+LVL
Sbjct: 170 PLDYLVWVTL-LSAWP--FPL---LALVGKRPAFMRFWREQWRLGLAVGFCVLFSYALVL 223

Query: 246 YAMTLTENVSFIVALRQTSIVFGLFMGIAFLGERWYVTRLLGVSAIVAGLVV 297
           +AM L  +++   ALR+ S++  +  G+ +L E + + RLL    ++ G++V
Sbjct: 224 WAMQL-GSIAEAAALREISVILVVLFGMRYLKEPFGLPRLLACGLVLVGMLV 274