Pairwise Alignments

Query, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., Permeases of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 96.3 bits (238), Expect = 7e-25
 Identities = 87/296 (29%), Positives = 143/296 (48%), Gaps = 32/296 (10%)

Query: 6   IILVLFSALLHAGWNII--GKRYQSSGPSFFLGATSATSLLLTPYIVWYFTKIGWSTLPT 63
           I LVLF+ALLHA WN +  G   +    +    A +  S+++   +         +    
Sbjct: 6   ICLVLFAALLHASWNAMLRGGTDRLWSMTIMCVAIALASVIVAALL---------APPAR 56

Query: 64  QFWLLLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARGL-PVLLVGAGTVMLGYDLQLNQ 122
             W  + +S +  + Y L L  +Y   D+G  YP+ARG+ P+L+V A ++  G  +  + 
Sbjct: 57  ASWFCVGLSAVLHVGYNLFLVRSYKSGDLGQTYPIARGVSPILIVLAASLFAGERVVPSG 116

Query: 123 WLGFALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGTAGYSIIDKEALAIIEQTV 182
            LG AL++ G L++     R+      A   + +AL      A YS++D   + +     
Sbjct: 117 LLGIALVSTGILLLAYTGRRR------ALPDLPYALGTGFFIAAYSVVDGIGVRL----- 165

Query: 183 GSQMPASYSAVLYLGIQFWAMCIPLAIWYLLTGQRAPFVEAWRIRYTATLAG-LMMGGTY 241
            S  P +Y+A + L    W + +PL ++  L   R+ F  AWR    A  AG L+    Y
Sbjct: 166 -SGAPMAYTAWMCL---LWGVMMPL-VYIGLRDARSLF--AWRPGIAAAFAGGLVSLLAY 218

Query: 242 SLVLYAMTLTENVSFIVALRQTSIVFGLFMGIAFLGERWYVTRLLGVSAIVAGLVV 297
            +V+YAM     +  + ALR+TS++F   +G AFLGE   + +LL  + I  G +V
Sbjct: 219 GVVIYAMAHAP-MGAVSALRETSVMFAALIGYAFLGEALTLRKLLACAVIALGTLV 273