Pairwise Alignments

Query, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 39/300 (13%)

Query: 6   IILVLFSALLHAGWNIIGKRYQSSGPSFFLGATSAT---SLLLTPYIVWYFTKIGWSTLP 62
           I LVL  ALLHA WN + K    +G    L A   +   +++  P++  +    G   +P
Sbjct: 6   IALVLLGALLHATWNALVK----AGTEKSLDAAMVSLGGAVVALPFLP-FLPMPGSEAVP 60

Query: 63  TQFWLLLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARGL-PVLLVGAGTVMLGYDLQLN 121
                 ++VS L Q  Y   +A AY   DIG+ YPL RG+ P+++    ++++G  L   
Sbjct: 61  -----YILVSALFQFAYFQLVAAAYRAGDIGLVYPLMRGVAPLIVAATSSLVIGEKLTGG 115

Query: 122 QWLGFALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGTAGYSIIDKEALAIIEQT 181
              G   I+ G L +  +  +  R A      IV AL+ A   A Y+ +D          
Sbjct: 116 AMAGIMTISAGVLTLAFESRKGGRHA------IVLALLNACVIASYTYVD---------G 160

Query: 182 VGSQMPASYSAVLYLGIQFWAMCIPLAI---W-YLLTGQRAPFVEAWRIRYTATLAGLMM 237
           +G+++  S +A+ Y     W   +P  +   W +   G +       R  +   + G   
Sbjct: 161 IGARI--SGNAISY---TLWMALLPPVLLFGWAFARRGVKPVARHVSRHWWRGLIGGAGS 215

Query: 238 GGTYSLVLYAMTLTENVSFIVALRQTSIVFGLFMGIAFLGERWYVTRLLGVSAIVAGLVV 297
            G+Y L L+AMT    V+ + ALR+T+I+F + + + FL ER    R++    I  G ++
Sbjct: 216 IGSYGLALWAMTKAP-VATVAALRETAILFAVVISVVFLKERVSAWRIIAAFIIALGALL 274