Pairwise Alignments

Query, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 36/295 (12%)

Query: 8   LVLFSALLHAGWNIIGKRYQSSGPSFFLGATSATSLLLTPYIVWYFTKIGWSTLP---TQ 64
           LVL +A +HAGWN + K          +G    ++++L        + +G   +P     
Sbjct: 8   LVLGAAAMHAGWNAVVK----------VGLDGFSAVMLISMAAGVLSLLGLPFVPFPEPA 57

Query: 65  FWLLLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARG-LPVLLVGAGTVMLGYDLQLNQW 123
            W  L +SG   M Y + L  AY   D G  YP+ARG  P+++     ++L     L   
Sbjct: 58  SWPFLALSGCLHMGYNVALIGAYRAGDFGQIYPIARGAAPLMVAVLSALLLDEPPGLVAA 117

Query: 124 LGFALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGTAGYSIIDKEALAIIEQTVG 183
           LG AL+  G   + L   R         L    AL+AAL T+ +      A  + +   G
Sbjct: 118 LGIALLVGG---VWLMSIRGGAVGRSGGLPERRALLAALMTSCFI----AAYTLSDGLGG 170

Query: 184 SQMPASYSAVLYLGIQFWAM--CIPLAIWYLLTGQRAPFVEAWRIRYTATLAGLMMGGTY 241
               ++++  L+L    +A+   + L +  +L G RA F    R        G +  G Y
Sbjct: 171 RAAGSAHAYALWL----FALDGVLALLVTVVLRG-RAIFKGMARALPAGIGGGALSLGAY 225

Query: 242 SLVLYAMTLTENVSFIVALRQTSIVFGLFMGIAFLGE---RWYVTRLLGVSAIVA 293
             V++AM++   +  + ALR++S++F L + + FLGE   RW     LG +A++A
Sbjct: 226 WTVIWAMSVAP-LGQVAALRESSVLFALLISVVFLGEKASRW----RLGAAALIA 275