Pairwise Alignments

Query, 490 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., proton/peptide symporter family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 102/490 (20%), Positives = 197/490 (40%), Gaps = 58/490 (11%)

Query: 19  SFYGVMVILTRFFL--------EDLNYSEADTMM---VVGAFSSIGPLFAIAGGFIADKF 67
           SFYG+  ILT F +        E L   EA  +    V+G +      F + GG+I D+ 
Sbjct: 25  SFYGMRNILTPFLMTALLLSVPEHLRAGEAKDVFHSFVIGVY-----FFPLLGGWIGDRL 79

Query: 68  LGAYRSLAISYVTFAIGYALL-VLGASSTHVPLSLVGIALASYARGLMSPSYPSLYKRTF 126
            G Y ++    + + +G+A L +   S T     L  IAL S   G + P   S     F
Sbjct: 80  FGKYNTILWLSLLYCVGHAFLAIFEDSKTGFYTGLFLIALGS---GGIKPLVSSFMGDQF 136

Query: 127 --ASEEDFNNGYPVNYSVNNVGALLGQYLFPMLVLLLGFHGSFALSALMATLATITLVVM 184
             +++      + + Y   N G+       P+L+   G   +F +  ++  +AT+     
Sbjct: 137 DQSNKSLAQKAFDMFYFTINFGSFFASLSMPLLLKHFGAAVAFGIPGVLMFIATVFFWAG 196

Query: 185 RRPLIEVASEKDQQSVSM---------------GNWIAFTLLSLAMVGLVFFMFSNMVIG 229
           R   + +  E    +  +               G  +A     LA++ L F     +V  
Sbjct: 197 RHRYVHMPPEPKNPNGFLPVIKTALLSPGANRFGLALALMGTVLAVIALGFMPSLGLVTS 256

Query: 230 QNIVYAIGLAAIVYFINLMLKARRA----EALK----MGTILIVTVLTTCFFVYYGQMMT 281
             +   + +  +    ++ L   RA    EA++    +  IL++  L T F+  + Q  +
Sbjct: 257 LCLALVLLMGFVGSGASMQLDRARARHGDEAVEGVRAVMRILVLFALVTPFWSLFDQKAS 316

Query: 282 SMTMVTINTMRGELFGIIPIAPEASMAMNPLWCIVAGPVISY-LFPTLEKRGITFSTATK 340
           +  +      + E F      P    A+NPL  ++  P  ++ L+PTLE+ G   +   K
Sbjct: 317 TWILQANEMTKPEWF-----EPAMMQALNPLLVMILIPFNNFVLYPTLERWGFRLTALGK 371

Query: 341 IAFAFVLTAISFGILTFAVSTVGEEAIIRPEVFLVIHFFQAFAEVVVGSLVVAFILSVAP 400
           +A     + +S+ ++      +   + +     ++ +    F EV+V +  + F  S AP
Sbjct: 372 MASGIAFSGLSWVVIGSIQLMMDGGSAVSIVWQVLPYALLTFGEVLVSATGLEFAYSQAP 431

Query: 401 KQIENFSVSLFYIAMALSGIIGAVFSTSIALEKGQVVTQQIVQIIYGDYFKLLTVLAVVM 460
           K ++   +S + +++ +  +   + + S+   KGQ +T  I     G    +        
Sbjct: 432 KTMKGTIMSFWTLSVTVGNLWVLLANASV---KGQGMTDWIA----GTGLSVTAFQMFFF 484

Query: 461 VGVALLASVL 470
            G AL+A+ +
Sbjct: 485 AGFALVAAAV 494