Pairwise Alignments

Query, 490 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., proton-dependent oligopeptide transporter (POT) family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  140 bits (352), Expect = 1e-37
 Identities = 108/472 (22%), Positives = 217/472 (45%), Gaps = 25/472 (5%)

Query: 20  FYGVMVILTRFFLEDLNYSEADTMMVVGAFSSIGPLFAIAGGFIADKFLGAYRSLAISYV 79
           FYG+  ++  F ++ L +++    +V  A +++  +    GG++ DK LG  R++ +   
Sbjct: 28  FYGMQALIVYFMVQRLGFADERANLVWSACAALIYVAPAIGGWVGDKVLGTKRTMLLGAG 87

Query: 80  TFAIGYALLVLGASSTHVPLSLVGIALASYARGLMSPSYPSLYKRTFASEED-FNNGYPV 138
              +GYAL+ +   +T    S +G+ +     GL  P+  +L ++ +  ++   ++ + +
Sbjct: 88  ILTLGYALMAVPTDNTWFLFSALGVIVVG--NGLFKPNAGNLVRKIYDGDDSKIDSAFTI 145

Query: 139 NYSVNNVGALLGQYLFPMLVLLL--------GFHGSFALSALMATLATITLVVMRRPLIE 190
            Y   NVG+     L P +   +        G+H +FA+  +   +     ++MR  L  
Sbjct: 146 YYMAVNVGSTFSMLLTPWIKDYVNANYGDGFGWHAAFAVCFVGLIVGIGNYMMMRHTLDN 205

Query: 191 VASEKDQQSVSMGNWIAFTLLSLAMVGLVFFMFSNMVIGQNIVYAIGLAAIVYFINLMLK 250
             SE D   V      A    SL  V +   +     I +  VY  GL  +  FI+L+  
Sbjct: 206 YGSEPDLLPVDKRKLAAVLGASLLAVVVSAVILEFEDIARVFVYGAGLVVLGIFIHLIRT 265

Query: 251 ARRAEALKMGTILIVTVLTTCFFVYYGQMMTSMTMVTINTMRGELF----GIIPIAPEAS 306
           +  +E   +   L++T+ +  FF++Y QM TS+ +  +  +  +       +   +P   
Sbjct: 266 SEESERAGLLAALVLTLQSVFFFIFYQQMSTSLALFALRNVDWDFVVMGQHLWTWSPAQF 325

Query: 307 MAMNPLWCIVAGPVISYLFPTLEKRGITFSTATKIAFAFVLTAISFGILTFAVSTVGEEA 366
            A+NP+W +V  P++++ +    K     S A K A  F + A  F    F  S  GE A
Sbjct: 326 QALNPIWIMVLSPILAWAYAWGGKHNKDISIAAKFALGFAVVAAGF----FIYSVAGEFA 381

Query: 367 II-RPEVFLVIHFFQAFA--EVVVGSLVVAFILSVAPKQIENFSVSLFYIAMALSGIIGA 423
           +  +   +++I  + A++  E++V  L +A I    P+++  F +  +++A  +S  +G 
Sbjct: 382 VNGKTSSWVMIWGYGAYSLGELLVSGLGLAMIARYVPERMGGFMMGAYFVATGISQYLGG 441

Query: 424 VFSTSIALEKGQVVTQQIVQI-IYGDYFKLLTVLAVVMVGVALLASVLIRKM 474
           V +   ++ +G  +T  +  + IY   F  L   A+    +AL    L+R++
Sbjct: 442 VVANFASVPQG--ITNPLETLTIYTSLFNKLGFAALGCTLIALAVLPLMRRL 491