Pairwise Alignments

Query, 490 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., putative H+/peptide symporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 93/458 (20%), Positives = 182/458 (39%), Gaps = 52/458 (11%)

Query: 20  FYGVMVILTRFFLEDLNYSEADTMMVVGAFSSIGPLFAIAGGFIADKFLGAYRSLAISYV 79
           FY +M IL  F       +  +   +   F     + A+ GG IADK      ++    V
Sbjct: 23  FYTMMAILVLFLQAKFGMNGKEAGFIYSTFYFSIYILALVGGIIADKTRNYKGTIFTGIV 82

Query: 80  TFAIGYALLVLGASST------HVPLSLVGIALASYARGLMSPSYPSLYKRTF-----AS 128
             A+GY LL + + +       ++ ++   + + ++  GL   +  +L  + +     AS
Sbjct: 83  LMAVGYLLLAIPSKTPVDNKTFYLVITCASLFVIAFGNGLFKGNLQALVGQMYDNPQYAS 142

Query: 129 EEDFNNGYPVNYSVNNVGALLGQYLFPML----VLLLGFHGSFALSAL----MATLATIT 180
             D  +G+ + Y   N+GA+   +    +    +   G++    L AL    +A   +  
Sbjct: 143 MRD--SGFSLFYMFINIGAIFAPFAAVGVRNWWLSTFGYNYDADLPALCHGHLAGTLSPE 200

Query: 181 LVVMRRPLIEVASEKDQQSVSM-----------GNWIAFTLLSLAMV-GLVFFMFSNMVI 228
                  L+E AS    Q  +            G   AF +  +AMV  L  ++ +    
Sbjct: 201 ATETYHTLVEKASNAPVQDYTAFASDYLNVFTTGFHYAFGVAIIAMVISLTIYLLNKRNF 260

Query: 229 GQNIVYAIGLAAIVYFINLMLKARRAEALKMGTILIVTVLTTCFFVYYGQMMTSMTMVTI 288
                 A+  +A    + + ++  +     +  +  V +    F+  + Q   ++T    
Sbjct: 261 PDPSKRAVASSASSATVEMSIQEVKQRMYALFAVFGVVIF---FWFSFHQNGLTLTYFAK 317

Query: 289 NTMRGELFGIIPIAPEASMAMNPLWCIVAGPVISYLFPTLEKRGITFSTATKIAFAFVLT 348
                 LFG+ PI+ E   ++NP + +   PVI  +F +  +RG   ST  KIA    + 
Sbjct: 318 EYTDLNLFGM-PISAELFQSLNPFFVVFLTPVIMAIFASQRRRGKEPSTPKKIAIGMGIA 376

Query: 349 AISFGILTFA-----------VSTVGEEAI-IRPEVFLVIHFFQAFAEVVVGSLVVAFIL 396
           A++F ++              +  VG   + + P + ++ +     AE+ +  L ++F+ 
Sbjct: 377 ALAFIVMAVGSYFANLPLHKDIIAVGTSPVKVTPFLLMLTYLILTVAELYISPLGISFVS 436

Query: 397 SVAPKQIENFSVSLFYIAMALSG---IIGAVFSTSIAL 431
            VAP + +      +  A AL     +IGA+   SI +
Sbjct: 437 KVAPPKYQGIMQGGWLGATALGNQLLVIGAILYESIPI 474