Pairwise Alignments

Query, 490 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., amino acid/peptide transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  157 bits (396), Expect = 1e-42
 Identities = 114/484 (23%), Positives = 226/484 (46%), Gaps = 18/484 (3%)

Query: 20  FYGVMVILTRFFLEDLNYSEADTMMVVGAFSSIGPLFAIAGGFIADKFLGAYRSLAISYV 79
           +YG+  ++  F ++ L + ++   +V  A +++  +    GG++ DK LG  R++ +   
Sbjct: 28  YYGMQALIVYFMVQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRTMLLGAG 87

Query: 80  TFAIGYALLVLGASSTHVPLSLVGIALASYARGLMSPSYPSLYKRTFASEED-FNNGYPV 138
             ++GYAL+ +   +T    S +G+ +     GL  P+  +L ++ +  ++   ++ + +
Sbjct: 88  ILSVGYALMTVPTENTWFMFSALGVIVVG--NGLFKPNAGNLVRKIYEGDDSKIDSAFTI 145

Query: 139 NYSVNNVGALLGQYLFPMLVLLL--------GFHGSFALSALMATLATITLVVMRRPLIE 190
            Y   NVG+     L P +   +        G+H +FA+  +   +      +M + L  
Sbjct: 146 YYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGLIVGLGNYALMHKSLAN 205

Query: 191 VASEKDQQSVSMGNWIAFTLLSLAMVGLVFFMFSNMVIGQNIVYAIGLAAIVYFINLMLK 250
             SE D + V+  N     +L+   V     +     + +  VYA G+A +  F +L+  
Sbjct: 206 YGSEPDTRPVNKKNLAIVLVLAALSVVASAIILEYEDVARVFVYAAGVAVLGIFFHLIRT 265

Query: 251 ARRAEALKMGTILIVTVLTTCFFVYYGQMMTSMTMVTINTMRG--ELFG--IIPIAPEAS 306
           +  +E   +   LI+TV T  FF++Y QM TS+ +  +  +    ++FG  +   +P   
Sbjct: 266 SEPSERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQVFGTHLWTWSPAQF 325

Query: 307 MAMNPLWCIVAGPVISYLFPTLEKRGITFSTATKIAFAFVLTAISFGILTFAVSTVGEEA 366
            A+NP+W +V  PV+++ +    +    FS A K A  F + AI F I  FA      E 
Sbjct: 326 QALNPIWIMVLSPVLAWSYSWAGRNNKDFSIAAKFALGFAVVAIGFFIYGFA-GQFAVEG 384

Query: 367 IIRPEVFLVIHFFQAFAEVVVGSLVVAFILSVAPKQIENFSVSLFYIAMALSGIIGAVFS 426
                V +  +   +  E++V  L +A I    P ++  F +  +++A  +S  +G V +
Sbjct: 385 KTSSWVMIWGYASYSLGELLVSGLGLAMIARYVPARMGGFMMGAYFVASGISQYLGGVVA 444

Query: 427 TSIALEKGQVVTQQIVQIIYGDYFKLLTVLAVVMVGVALLASVLIRKMLAAADVNSPSIQ 486
              ++ +  V   Q +  +Y + F  L + AVV   +AL    L+R++  +   ++ SI+
Sbjct: 445 NFASVPQDLVDPLQTLP-VYTNLFNKLGIAAVVCTFIALAVLPLMRRLTESHHAHN-SIE 502

Query: 487 DKQA 490
           D  A
Sbjct: 503 DNAA 506