Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., hypothetical protein from Azospirillum brasilense Sp245

 Score =  507 bits (1305), Expect = e-148
 Identities = 259/580 (44%), Positives = 349/580 (60%), Gaps = 9/580 (1%)

Query: 40  GEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNFNRFASRGVAAANTAELYDPLMFSP 99
           G  KY  +F HFDYVNP APK G++     G++D+ N F  RG  AA  +  +D L    
Sbjct: 46  GTPKYGPDFQHFDYVNPDAPKGGEIKLATYGSFDSLNPFILRGSTAAGASLPFDTLTVES 105

Query: 100 ADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMAEGVPQY 159
            DE+ + Y L+A  I  ++D +W+   L P ARFHDG P+TA DV +SFE    +G P Y
Sbjct: 106 GDEVLTRYGLLAETITVAEDRSWVRFTLRPQARFHDGAPVTADDVVWSFETLRDKGHPLY 165

Query: 160 RVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYWQ-----YKNLAEPLN 214
           R YY DV   +   ERTV    +     +L  +     VLPKH ++      ++ A    
Sbjct: 166 RTYYADVTKAEKTGERTVTFTFRDGGNPELPVIMGQLPVLPKHVFEGNGSGVRDFASTTL 225

Query: 215 EPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDTVMLEAF 274
           +P VGSG Y+IV+ +PG+S+ ++   D+WAKDLPVN GR NF +I++DYYRD  V+ EAF
Sbjct: 226 DPIVGSGPYRIVEVQPGRSLVFERVQDWWAKDLPVNRGRYNFDRIRFDYYRDLDVVFEAF 285

Query: 275 KAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVFQDVRV 334
           KAG  D R E+ +K W T Y       G I +EEI HQ P   Q F+FN++RPVF D +V
Sbjct: 286 KAGAIDFRVEHSSKNWVTGYDVPAVRDGHIVREEIKHQDPQGMQAFVFNSRRPVFADRKV 345

Query: 335 REALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQLPARVF 394
           REALNY  D+EW   NL Y  +QRT+S+F N+E  + GLP+  EL +L P++ ++P +VF
Sbjct: 346 REALNYLFDYEWTRANLSYGLFQRTKSFFSNSELASTGLPSPEELKLLEPFRGKVPEQVF 405

Query: 395 TETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYSPTTER 454
           T+ ++P  TDGSG IR  +R A +LLKEAGWELK   + N KTGEP+ FE+L+  P  +R
Sbjct: 406 TKPFEPPQTDGSGNIRPNLRTALSLLKEAGWELKGNKLLNAKTGEPMRFEILLVQPDMDR 465

Query: 455 IAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGFSANPYPSPNLLIVWNSNY 514
           I  P  +NL+  GIE  IR VDT QY  R+   DFDM+      +  P       W +  
Sbjct: 466 IVQPFVRNLERAGIEAAIRVVDTAQYQNRIDRYDFDMVIQRILQSTSPGNEQRDYWQAAR 525

Query: 515 MD--SSYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDRVLQWNFYIIPQWHLSMY 572
            D   S N AG   PV+DAL +++ ++  D E L     ALDRVL W +Y+IPQWH  + 
Sbjct: 526 ADQPGSRNLAGIKDPVVDALIDKVIQA-PDRESLITATRALDRVLLWGWYVIPQWHDDVR 584

Query: 573 RVAMWDKFSRPSVLPKYSLGL-DTWWIDQEKAARLPEKRR 611
           RVA W++FS P+V PKY L   DTWW+D +K A+L    R
Sbjct: 585 RVAYWNRFSHPAVAPKYGLAFTDTWWVDPDKNAKLANTAR 624