Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  102 bits (253), Expect = 6e-26
 Identities = 108/436 (24%), Positives = 180/436 (41%), Gaps = 53/436 (12%)

Query: 108 PLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMAEGVPQYRVYYQDVK 167
           PL+A++   S+D       L  + R+HDG+  TA+ V FS    + E  P+ R  +  VK
Sbjct: 91  PLLATEWTVSEDGLRYWFKLRQDVRWHDGRDFTAEAVAFSILA-LKENHPRGRATFAHVK 149

Query: 168 SVKAIAERTVRIEMKQPNREQLFSLAQ-STRVLPKHYWQYKNLAE-PLNEPPVGSGAYQI 225
               +    V + + +P    L + A     ++PKH ++   +AE P N  PVG+G Y+ 
Sbjct: 150 EANVLNSHEVELTLAKPAPYLLTAFASFEAPIVPKHLYEGTKIAENPHNVAPVGTGPYKF 209

Query: 226 VDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDTVMLEAFKAGEFDLREEN 285
           V++  G    +  N DYW    P         QI + +  D    + A + GE  +   +
Sbjct: 210 VEWVRGSHALFVRNEDYWGSPKPY------LDQIIFRFIVDPAAAVAAIETGEVQV---S 260

Query: 286 QAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVFQDVRVREALNYALDFE 345
            A    T       +  L+   + A  +P+  +   FN +     D++VR A+ +A+D +
Sbjct: 261 TANLPLTDIDRLKANPNLVVDTDPAPYSPSIARA-EFNLENKYLADIKVRHAIAHAVDKD 319

Query: 346 WMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQLPARVFTETYQPSVTDG 405
           ++  N  Y  Y         T  +    P+ A+      Y   LP   F       + D 
Sbjct: 320 FI-VNTVYLGYA--------TRLDGPVSPDLAKF-----YSPDLPKYEFDPAKSEKLLDE 365

Query: 406 SGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYSPTTERIAIPLQKNLQL 465
           +G  R             G+  K  +     +G P          T E IA  L K    
Sbjct: 366 AGYAR----------GADGFRFKLFIDPTQPSGPP--------KQTAEYIAQALAK---- 403

Query: 466 MGIEMKIRTVDTTQYTKRL-RDRDFDMISHGFSANPYPSPNL-LIVWNSNYMDS--SYNS 521
           +GI++++RT D   + KR+  DRDFD+   G S    P+  +  + W+ N+       N 
Sbjct: 404 VGIKVELRTQDFATFVKRVFTDRDFDIAIEGMSNLYDPTVGVQRLYWSKNFKPGVPFTNG 463

Query: 522 AGANHPVIDALTEQIA 537
           +  ++P +D L E  A
Sbjct: 464 SKYSNPEVDRLLETAA 479