Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 89.7 bits (221), Expect = 3e-22
 Identities = 111/457 (24%), Positives = 177/457 (38%), Gaps = 73/457 (15%)

Query: 108 PLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMAEGVPQY-------R 160
           P +A   + SDD       L    +FHDG    A+ V+F+F++ + +  P Y        
Sbjct: 77  PALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKDHPFYDTGPFPLS 136

Query: 161 VYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYWQYKNLAEPLNEPPVGS 220
             +  VK+V  + E TV  ++ +     L +LA  T ++       K+  +     P G+
Sbjct: 137 FNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVEKH-GKEYGRSPSGT 195

Query: 221 GAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYR---DDTVMLEAFKAG 277
           G ++ V++   Q V  + NPDYW          ++ A++Q   +R   D    +    AG
Sbjct: 196 GPFKFVEWLSNQRVVVERNPDYW----------DSAAKLQAVVFRPITDANTRVAEMMAG 245

Query: 278 EFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVFQDVRVREA 337
             D+  E      AT     NF         +A QA       I NT++  F D RVR+A
Sbjct: 246 GIDVMVEVPPDNLATFEQDANF--------AVAEQAGPHVWFTILNTKQGPFADKRVRQA 297

Query: 338 LNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQLPARVFTET 397
            NYA     +NK    D   R       T   A G         + P    + + V    
Sbjct: 298 ANYA-----VNKQTLVDDVLR------GTATVAAG--------PIPPAFNWVESSVEPYA 338

Query: 398 YQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYSPTTERIAI 457
           + P              +A ALL EAG E         + G  +        P T   AI
Sbjct: 339 HDP-------------EKAKALLAEAGVENPQVTFYVTEGGSGM------LDPITMGAAI 379

Query: 458 PLQKNLQLMGIEMKIRTVDTTQYTKRLR---DRDFDMISHGFSAN-PYPSPNLLIVWNSN 513
             Q +LQ +G ++KI T +   +  R+    +   DM    +  N P   P L +  ++ 
Sbjct: 380 --QADLQAVGFKVKIETYEWNTFLGRVNPGLEGKADMAEMAWMTNDPDTVPYLTLRTDAM 437

Query: 514 YMDSSYNSAGANHPVIDALTEQIAKSQQDTEKLRALG 550
                +NS   ++P +D L E+  +S    E+ +  G
Sbjct: 438 PDKGGFNSGYYSNPQLDELLEKARRSTDQAERGKLYG 474