Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., extracellular solute-binding protein from Rhodopseudomonas palustris CGA009

 Score =  432 bits (1110), Expect = e-125
 Identities = 232/584 (39%), Positives = 345/584 (59%), Gaps = 17/584 (2%)

Query: 39  FGEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNFNRFAS--RGVAAANTAELYDPLM 96
           FGE KYP  F  FDYVNP+APK G      LGT+DNFN   +  +G  A     LY+ LM
Sbjct: 51  FGELKYPAGFAQFDYVNPKAPKGGAARQIALGTFDNFNLAVAGVKGNIAGPVGYLYETLM 110

Query: 97  FSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMAEGV 156
               DE+ + Y L+A    + DDF+W+   +   AR++DGKP+TA DV FSF+  + +  
Sbjct: 111 TPSQDEVGTEYGLLAEGAAHPDDFSWVIYRVRKEARWNDGKPVTADDVVFSFDA-LKKYS 169

Query: 157 PQYRVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYWQ-------YKNL 209
           P+Y  YY+ V   + + ER VR     P   +L ++     VLPKH+W+        +++
Sbjct: 170 PRYASYYRHVVKAEKVGERDVRFTFDAPGNRELPTIVGELMVLPKHWWEGTDAQGRKRDV 229

Query: 210 AEPLNEPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDTV 269
           +    EPP+GS  Y+I DF  G+S+  +   DYW + LPV +G+NNF +++++Y+RD+TV
Sbjct: 230 SATTLEPPLGSAPYKIKDFVAGRSIVLERVKDYWGEKLPVRIGQNNFDELRFEYFRDNTV 289

Query: 270 MLEAFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVF 329
            LEAFKA + D   EN AK WAT+Y     +   + KEE         Q F+ NT+R +F
Sbjct: 290 ALEAFKADQADWIMENSAKQWATAYDFPAVNDKRVVKEEFPINDSGRMQAFVLNTRRQMF 349

Query: 330 QDVRVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQL 389
           +D RVR A NYA DFE MNK LFY QY+R  S+F+ TE  + GLP   ELA+L   ++++
Sbjct: 350 KDPRVRRAFNYAFDFEEMNKQLFYGQYKRIASFFEGTELASSGLPEGQELALLETVRDKV 409

Query: 390 PARVFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYS 449
           PA +FT+ Y   V      +R  +REA  L+KEAG+++K++ + +  +G+P++ E+L+  
Sbjct: 410 PAELFTQPYTNPVGGNPEAVRANLREAIKLVKEAGFDIKDRKLVD-PSGKPVAVEILVQD 468

Query: 450 PTTERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGFSANPYPSPNLLIV 509
           P++ERIA+  + +L+ +G+ + IR VD  QY  R+R  DFD+I+  +  +  P       
Sbjct: 469 PSSERIALFYKPSLERLGVTVSIRVVDDAQYQNRIRAFDFDIITDLWGQSLSPGNEQRDY 528

Query: 510 WNSNYMD--SSYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDRVLQWNFYIIPQW 567
           W S   +   S+N+ G  +P +D L E++  + +D   L A   ALDRVL WNFY++PQ+
Sbjct: 529 WGSQAANEQGSHNTIGIKNPAVDELIEKVIYA-KDRPSLIAATRALDRVLLWNFYVVPQF 587

Query: 568 HLSMYRVAMWDKFSRPSVLPKYS-LGLDT-WWIDQEKAARLPEK 609
                R A WD+F   + LPKY+  GL   WW D +KAA L ++
Sbjct: 588 TYGFMRYARWDRFGH-APLPKYARSGLPALWWYDADKAANLGKR 630