Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., ABC transporter extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score =  388 bits (996), Expect = e-112
 Identities = 221/609 (36%), Positives = 329/609 (54%), Gaps = 33/609 (5%)

Query: 19  LALSSQFSWAAVIETTRLVGFGEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNFNRF 78
           L +S  F+   VI++     FGE KYPE F HFDYVNP+APK G+++   +GT+D+ N +
Sbjct: 37  LTVSLAFAEERVIKSHGFTEFGELKYPEGFAHFDYVNPEAPKGGELSLSAVGTFDSMNPY 96

Query: 79  ASRGVAAANTAELYDPLMFSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKP 138
             +G   A +A+ ++ LM    DE  SYY L+A  + Y +   W+  ++ P ARF DG P
Sbjct: 97  TRKGRGGAMSADHFESLMIGSYDEPGSYYGLLAESLEYPESQDWVIFNMRPEARFSDGTP 156

Query: 139 ITAQDVEFSFEKFMAEGVPQYRVYYQDVKSVKAIAERTVRIEMKQPNREQLF-------- 190
           +TA+DV FS    + +G+  Y          +A+ +R  + E+  P+R + +        
Sbjct: 157 VTAEDVVFSHNLLLEQGLKSY---------AEAVKKRIPKAEVLGPHRVKFYFSPDFPRR 207

Query: 191 ---SLAQSTRVLPKHYWQY----KNLAEPLNEPPVGSGAYQIVDFKPGQSVTYKLNPDYW 243
              +    T V  K +++     + L EP  +P +GSG Y +      Q + YK NPDYW
Sbjct: 208 AMITQVAGTSVFSKSWFEADPENRRLDEPRLDPGIGSGPYVLESADVNQRIVYKRNPDYW 267

Query: 244 AKDLPVNVGRNNFAQIQYDYYRDDTVMLEAFKAGEFDLREENQAKFWATSYTGRNFDQGL 303
             D+ VNVGR+N+ +I+ +Y+ D    +E FKAG + +R EN +K WAT+Y      +G 
Sbjct: 268 GNDVNVNVGRHNYDRIRIEYFGDSVAAMEGFKAGVYTMRPENSSKSWATAYGFDAVKEGD 327

Query: 304 IKKEEIAHQAPASTQGFIFNTQRPVFQDVRVREALNYALDFEWMNKNLFYDQYQRTRSYF 363
           + K E       +  GF+ N  RP FQD RVREA+  A +FEW N +L Y  + +  S++
Sbjct: 328 VVKGEFPDGNVPAASGFVMNLLRPKFQDPRVREAIQLAYNFEWTNDSLQYGLFAQRHSFW 387

Query: 364 QNTEYEAQGLPNAAELAVLTPYKEQLPARVFTETYQPSVTDGSGRI----RTQMREAFAL 419
           Q++  EA+GLP   EL VL    +Q+   + T   +P +   S       R  +R A  L
Sbjct: 388 QDSALEAKGLPEGRELEVLQDLGDQIDPALLTS--EPVMAHSSKPARPADRRNLRRAMKL 445

Query: 420 LKEAGWELKNKVMTNVKTGEPLSFELLIYSPTTERIAIPLQKNLQLMGIEMKIRTVDTTQ 479
           L EA W + +  +     GE L  E LI SPT ERI  P   NL+ MG++     VD  Q
Sbjct: 446 LDEADWAVGDDGLRRNAKGEVLKLEFLIDSPTIERIVQPYIANLRQMGVDAISNRVDFAQ 505

Query: 480 YTKRLRDRDFDMISHGFSANPYPSPNLLIVWNSNYMD-SSYNSAGANHPVIDALTEQIAK 538
           YT R R++DFDMI++ +     PS  L   + S+  + S +N AG   P +D L   I K
Sbjct: 506 YTSRRREKDFDMITYAYPKYLQPSTGLYQQFGSDAHEFSVFNPAGMADPAVDTLIGAIVK 565

Query: 539 SQQDTEKLRALGSALDRVLQWNFYIIPQWHLSMYRVAMWDKFSRPSVLPKYSLGL-DTWW 597
           + +D E+L A   ALDRVL+   +++P W+L +  VA W+ + +P  LP + LGL D WW
Sbjct: 566 A-EDQEELYANVRALDRVLRAKRFMVPTWYLDVNWVAYWNFYEQPETLPLFDLGLSDVWW 624

Query: 598 IDQEKAARL 606
           ++ EK A L
Sbjct: 625 VNAEKEAAL 633