Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., antibiotic ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  622 bits (1603), Expect = 0.0
 Identities = 307/596 (51%), Positives = 396/596 (66%), Gaps = 3/596 (0%)

Query: 17  VTLALSSQFSWAAVI-ETTRLVGFGEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNF 75
           + L L S  S A  I E+ R    GE KY   FTH+DY NP APK G +T   +GT+DNF
Sbjct: 8   ILLTLFSLQSQAQTIKESDRFAIIGEPKYAAGFTHYDYANPAAPKGGAITLAAIGTFDNF 67

Query: 76  NRFASRGVAAANTAELYDPLMFSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHD 135
           NR+A RG     T  LYD L  +  DE  SYYPLIA   RY+DDF+W+EI LNP AR+HD
Sbjct: 68  NRYAMRGNPGIRTESLYDTLFTTSDDEPGSYYPLIAEHARYADDFSWMEITLNPRARYHD 127

Query: 136 GKPITAQDVEFSFEKFMAEGVPQYRVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQS 195
           G PITA DV F+F+KFM EGVPQ+R+YY+  + VKAIA  TVRI++  P +E + SL  +
Sbjct: 128 GSPITASDVAFTFQKFMTEGVPQFRLYYKGTR-VKAIAPLTVRIDLAAPGKENMLSL-MT 185

Query: 196 TRVLPKHYWQYKNLAEPLNEPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNN 255
             V+P+ YW+   L++PL+ PP+ SG Y+I  ++ GQ +TY    DYWA DLPVN GR N
Sbjct: 186 LPVMPEKYWKNHKLSDPLSAPPLASGPYRITAWRMGQYITYSRVKDYWAADLPVNRGRWN 245

Query: 256 FAQIQYDYYRDDTVMLEAFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPA 315
           F  ++YDYY DD V  EAFKAG  D REEN AK WAT Y GRNF  G I K+E  + +  
Sbjct: 246 FDSLRYDYYLDDNVAFEAFKAGAVDRREENVAKNWATRYVGRNFTHGYIVKDEYTNTSAQ 305

Query: 316 STQGFIFNTQRPVFQDVRVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPN 375
           +TQ   FN QRPVF D RVREA+  A DFEWMNK LFY  Y R  S+FQNTEY A+  P+
Sbjct: 306 NTQWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYGSYSRANSFFQNTEYAARDYPD 365

Query: 376 AAELAVLTPYKEQLPARVFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNV 435
           A ELA+LTP K+++PA VFT+ Y+P ++ G G  R  + +A A+L +AGW +KN+   N 
Sbjct: 366 ADELALLTPLKKEIPAEVFTQIYRPPISSGDGFARANLLKADAILNQAGWIVKNQRRVNA 425

Query: 436 KTGEPLSFELLIYSPTTERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHG 495
           K+G+PL FELL+ S +++R  +P Q NLQ +GI M IR VD +QY+ R R RD+DM+ + 
Sbjct: 426 KSGKPLRFELLLPSGSSDRWVLPFQHNLQRLGIVMDIRQVDNSQYSNRKRSRDYDMMPNV 485

Query: 496 FSANPYPSPNLLIVWNSNYMDSSYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDR 555
           + A P+P   L + W+S Y++SSYN++G   P +D L  QI + Q + EKL  LG ALDR
Sbjct: 486 WRATPWPDTGLQVSWDSQYINSSYNASGVQSPAVDQLIAQIIRWQGNKEKLLPLGRALDR 545

Query: 556 VLQWNFYIIPQWHLSMYRVAMWDKFSRPSVLPKYSLGLDTWWIDQEKAARLPEKRR 611
           VL WN+Y++P W+++  R A WDKFS P     YS G +  W D  KAARLP  RR
Sbjct: 546 VLTWNYYMLPMWYMAQDRTAYWDKFSFPQTRAIYSSGFENGWYDASKAARLPADRR 601