Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 613 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  358 bits (919), Expect = e-103
 Identities = 216/588 (36%), Positives = 309/588 (52%), Gaps = 23/588 (3%)

Query: 39  FGEAKYPENFTHFDYVNPQAPKYGKVTFGE---LGTYDNFNRFASRGVAAANTAELYDPL 95
           +GE KY  +F HFDYVNP APK G +       L ++D FN F  RG  A     +++ L
Sbjct: 26  YGEPKYLADFKHFDYVNPNAPKGGTLVLANPSRLTSFDKFNPFTLRGNTAPGVDLMFESL 85

Query: 96  MFSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMA-E 154
               +DE+ S Y L+A  I  + D   +   +NP ARF +G P+TA DV+FS +   + +
Sbjct: 86  TVGSSDEVASAYGLLADDISIAPDGLSVTFHINPLARFSNGDPVTADDVKFSLDTLKSPQ 145

Query: 155 GVPQYRVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYWQYKNLAEPLN 214
             PQ+   + ++     +   T+R E  Q NRE L  LA    V  +  W  K     + 
Sbjct: 146 AAPQFASIFGEITRAVVVDPHTIRFEFHQRNRE-LPLLAGGIPVFSRK-WGMKPDGSRIA 203

Query: 215 ------EPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDT 268
                 E P+GSG Y I  +  G+++TY+ +P+YW   LPV VG NNF +I Y  Y D+T
Sbjct: 204 FDQLAFEKPIGSGPYLIEQYDNGRTITYRRDPNYWGAALPVRVGMNNFDRIVYKLYSDNT 263

Query: 269 VMLEAFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPV 328
             LEAFKAGE+D   E  A+ W     G+ FD G + K+          QGF+ NT+R +
Sbjct: 264 ARLEAFKAGEYDALVEYVARNWVRRDVGKKFDSGELIKQVFPQHNGTGMQGFMLNTRRSL 323

Query: 329 FQDVRVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQ 388
           FQDVRVR+AL+ ALDF+W+N+ LF++QY R  S+F NT+ +A+GLP+  ELA+L P++ +
Sbjct: 324 FQDVRVRKALDLALDFQWLNRQLFFNQYTRIDSFFANTDLQAKGLPSPGELALLEPWRAK 383

Query: 389 LPARVFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIY 448
           L   VF    +   TD  G +R  + EA ALL++AGW  ++  + N K GEP  FE+L  
Sbjct: 384 LDPAVFGPPPKQPDTDPPGSLRANLLEARALLQQAGWTYRDGALRNAK-GEPFRFEILDD 442

Query: 449 SPTT---ERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGFSANPYPSPN 505
           S ++   E I     +NLQ +GI+   R  D   Y KRL   DFD  +        P   
Sbjct: 443 SGSSAQMEPIVATFIRNLQKLGIQATFRVSDFAVYQKRLDAFDFDTTTIRMPDVQVPGSE 502

Query: 506 LLIVWNSNYMDS--SYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDRVLQWNFYI 563
            +  + S   D+  S N  G   PV+DA+   +  + Q  E+L     ALDRVL   +Y+
Sbjct: 503 QIERFGSKAADTQGSDNMIGLKSPVVDAILNALVHA-QTREQLVDATHALDRVLMHGYYV 561

Query: 564 IPQWHLSMYRVAMWDKFSRPSVLPKYSLG----LDTWWIDQEKAARLP 607
           +P W+ + +RVA     + P  LP Y          WW  Q  +   P
Sbjct: 562 VPHWYSATHRVAFKRGLAWPKTLPLYYSAEGWITSMWWFAQPPSQSQP 609