Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  457 bits (1177), Expect = e-133
 Identities = 216/360 (60%), Positives = 279/360 (77%), Gaps = 10/360 (2%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           M +YI RRLLL++PTL  I+ +NF I+Q APGGPVEQAIA L+G           GG  V
Sbjct: 1   MWAYIARRLLLIIPTLVIILLVNFVIVQAAPGGPVEQAIAHLQGI----------GGASV 50

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
              ++   +  + SRGLDPQ++++I +++GFDKP HER + ML  YA  +FG+S FRG  
Sbjct: 51  GGSSNTMTNSSRASRGLDPQLIKDIEKQYGFDKPAHERLWLMLSSYARLDFGKSFFRGAT 110

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           V DLI+E++PV+ISLGLW+TL+ YL+SIPLGI KA+HHGS FDVWSS  +IIGYA+P FL
Sbjct: 111 VTDLILEKMPVTISLGLWATLITYLVSIPLGIRKAVHHGSAFDVWSSTAIIIGYAMPAFL 170

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLS 240
           FA+ LI++FA G   +WFP+RGLVSDNF SL    ++ DYFWHL LP  ++VIGGFATL+
Sbjct: 171 FAMFLIVVFAGGTSLNWFPVRGLVSDNFESLSTLGKIADYFWHLVLPVTSLVIGGFATLT 230

Query: 241 MLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSML 300
           +LTKNSFL+EI +QYVVTARAKG+ ERR+LY HVFRNAML++++G P AFIS+FF GS+L
Sbjct: 231 ILTKNSFLNEITRQYVVTARAKGMSERRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSLL 290

Query: 301 IEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEAR 360
           IEV+FSL+G+G + +EA + RDYP+VF SL+I TL GLL+ ++ DL Y  VDPRIDF AR
Sbjct: 291 IEVIFSLDGLGRMSYEAAVSRDYPVVFGSLFIFTLFGLLIKLVGDLCYTLVDPRIDFAAR 350