Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., peptide ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  456 bits (1172), Expect = e-133
 Identities = 216/360 (60%), Positives = 280/360 (77%), Gaps = 10/360 (2%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           ML+YI+RRLLL++PTL  I+ +NF I+Q APGGPVEQAIA L+G           GG  +
Sbjct: 1   MLAYIVRRLLLIIPTLVIILLVNFVIVQAAPGGPVEQAIAHLQGI----------GGPAI 50

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
            +  DA   G + SRGLDPQ++++I +++GFDKP  ER + M+  YA  +FG+S FRG  
Sbjct: 51  GSSGDAISHGSRASRGLDPQLIKDIEKQYGFDKPAPERLWLMITSYARLDFGKSFFRGAT 110

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           V DLI+E++PV+ISLGLW+TL+ YL+SIPLGI KA+HHGS FD+WSS +++IGYA+P FL
Sbjct: 111 VTDLILEKMPVTISLGLWATLITYLVSIPLGIRKAVHHGSLFDIWSSTIIVIGYALPAFL 170

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLS 240
           FA+ LI++FA G   +WFP+RGLVS+NF  L    +V DYFWHL LP  A+V+GGFATL+
Sbjct: 171 FAMFLIVVFAGGTSLNWFPVRGLVSENFDQLSTLGKVADYFWHLVLPVTALVVGGFATLT 230

Query: 241 MLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSML 300
           +LTKNSFL+EI +QYVVTARAKGL ERR+LY HVFRNAML++++G P A IS+FF GS+L
Sbjct: 231 ILTKNSFLNEITRQYVVTARAKGLSERRVLYGHVFRNAMLLVVSGIPQALISVFFAGSLL 290

Query: 301 IEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEAR 360
           IEV+FSL+G+G + +EA + RDYP+VF SL+I TL GLL+ II DL Y  VDPRIDF AR
Sbjct: 291 IEVIFSLDGLGRMSYEAAVSRDYPVVFGSLFIFTLFGLLIKIIGDLCYTLVDPRIDFAAR 350