Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  461 bits (1185), Expect = e-134
 Identities = 217/361 (60%), Positives = 285/361 (78%), Gaps = 10/361 (2%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           ML YILRRLLL++PTL  I+ +NFFI+Q APGGPVEQAIA+L+G          GG    
Sbjct: 1   MLGYILRRLLLIIPTLLCILLVNFFIVQAAPGGPVEQAIARLQG---------IGGATVG 51

Query: 61  AAPTDAPVSGY-KGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGG 119
           A  +++  +G+ K SRGLDP ++++I R++GFDKP+HER + MLK+YA  +FG S FRG 
Sbjct: 52  AGASESAGAGHSKASRGLDPALIKQIERQYGFDKPLHERLWLMLKNYARLDFGSSFFRGA 111

Query: 120 DVIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGF 179
            V DLI++++PVSISLGLW+TLL YL+SIPLGI KA+ HGS+FD+WSS  +IIGYA+P F
Sbjct: 112 TVTDLILQKMPVSISLGLWATLLTYLVSIPLGIRKAVKHGSQFDIWSSTAIIIGYAMPAF 171

Query: 180 LFAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATL 239
           LFA++L+++F  G   +WFP+RGLVSDNF  L    ++ DYFWHL LP LA+VIGGFATL
Sbjct: 172 LFAMLLVVVFCGGTSLNWFPVRGLVSDNFEQLTTIGKIADYFWHLALPVLALVIGGFATL 231

Query: 240 SMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSM 299
           ++LTK+SFL+EI +QYV TARAKG+ ERR+LY HVFRNAML++++G P AFIS+FF GS+
Sbjct: 232 TLLTKHSFLNEITRQYVTTARAKGMSERRVLYGHVFRNAMLLVVSGIPQAFISVFFAGSL 291

Query: 300 LIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEA 359
           LIEV+FSL+G+G + +EA + RDYP+VF SL+I T+ GLL+ +I D+ Y  VDPRIDF A
Sbjct: 292 LIEVIFSLDGLGRMSYEAAVSRDYPVVFGSLFIFTVFGLLIKLIGDICYTLVDPRIDFSA 351

Query: 360 R 360
           R
Sbjct: 352 R 352