Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  150 bits (379), Expect = 4e-41
 Identities = 99/358 (27%), Positives = 169/358 (47%), Gaps = 47/358 (13%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           ML + LRR+L ++PT+  +  + F I  + PG       A                    
Sbjct: 1   MLRFTLRRVLQIIPTVVVVALLIFVIFSVVPGTFAASLFAD------------------- 41

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
                       G R  DPQ++  +   FG +KP+ ER+   + D A F+ G S      
Sbjct: 42  ------------GRRAADPQMIARLNEEFGLNKPLMERFVTYVTDLAQFDLGTSFRTRQP 89

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           VIDLI +R+  S+ L + + +   +IS+PLG   A+  GS  D  +    + G ++P F 
Sbjct: 90  VIDLINDRMWASLQLAIAAMIFALVISVPLGFVAALRPGSVLDTVTMIGAVSGLSMPQFW 149

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLS 240
             ++++ LFA     +W P  G    +F              +L LP + + +   A L+
Sbjct: 150 LGLLMMYLFAL--QLNWLPSFGYGDGSFR-------------NLILPAVTLGVTPLALLA 194

Query: 241 MLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSML 300
             T+   LD +N  ++ TA +KG+ E +++  HV RNA+++I+      F S+    +++
Sbjct: 195 RTTRAGVLDVLNADFIRTAHSKGMSEAKVVRWHVARNALVLIVTTVGLQFGSL-IGQAVV 253

Query: 301 IEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFE 358
           IE +F+  GIG L  ++   RD P+V  ++ ++ L  L+++   DL Y  +DPRI  E
Sbjct: 254 IEKLFAWPGIGSLLVDSVASRDIPVVQGTILVIVLWFLVINTAVDLIYAAIDPRIKQE 311