Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., oligopeptide uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  155 bits (392), Expect = 1e-42
 Identities = 99/356 (27%), Positives = 172/356 (48%), Gaps = 53/356 (14%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           M+S+ILRRL   VPTL+ ++TI+FF+++ APGGP                          
Sbjct: 1   MISFILRRLASAVPTLFIVVTISFFLMRFAPGGP-------------------------- 34

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGES-LFRGG 119
                     +   R L P  +E + R +  D+P+  +Y   L +  T +FG S ++   
Sbjct: 35  ----------FNLERPLPPSTMENLMRTYHLDQPLWRQYATYLGNAVTGDFGPSYIYHDN 84

Query: 120 DVIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGF 179
           +V  LI + LP S+ LG ++ LL  +  +  G   A+   S  D    +V  IG  +P F
Sbjct: 85  NVAQLIGKGLPYSMELGFYALLLAVVGGVITGTIAALRQNSFLDFAVMSVSTIGVTVPNF 144

Query: 180 LFAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATL 239
           +   +L ++FA     +W P  G          W    L +   L LP +A+ +   A  
Sbjct: 145 VVGPVLTLIFAI--VLAWLPAGG----------WGDGSLRF---LILPMIALALPQLAVF 189

Query: 240 SMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSM 299
           + LT+ S ++ +N  ++ TA+A GL  R ++  H  R AML +++ + +   +   TGS 
Sbjct: 190 ARLTRGSMIEALNTDHIRTAKAYGLPSRAVVVTHAMRGAMLPVVS-YLAPCAAALLTGSA 248

Query: 300 LIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRI 355
           ++E +F++ G+G       I RDY LV  ++ ++ +  +L +++ D+ Y  +DPR+
Sbjct: 249 VVETIFTIPGVGRYFVLGAINRDYTLVMGTVILIAIFVILFNLLVDILYGLLDPRV 304