Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Klebsiella michiganensis M5al

 Score =  144 bits (362), Expect = 4e-39
 Identities = 102/371 (27%), Positives = 176/371 (47%), Gaps = 52/371 (14%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           ML +ILRRL LV+PT   I  + F  + + PG PV             +M          
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVM------------IMA--------- 39

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
                       G RG+ P+   ++    G DKP+ ++Y   +      + G SL     
Sbjct: 40  ------------GERGISPERHAQLLAEMGLDKPMWQQYVNYIWGVMHGDLGISLKSRIP 87

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           V +  V R   ++ LG+ + +   ++ IP+G+  A+  GS FD  S  + + GY++P F 
Sbjct: 88  VWEEFVPRFKATMELGVCAMIFAIIVGIPVGVLAAVKRGSIFDHTSVGLALTGYSMPIFW 147

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNF---ASLP-----------WYQ--QVLDYFWHL 224
           + ++LI+L +     +  P+ G +SD      +LP           W +    +D   H+
Sbjct: 148 WGMMLIMLVSV--QLNLTPVSGRISDTVFLDDTLPLTGFMLIDTAIWGEPGDFIDAVMHM 205

Query: 225 TLPTLAMVIGGFATLSMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIA 284
            LP + +     A +  +T++S L+ + + Y+ TARAKGL   R++  H  RNAML ++ 
Sbjct: 206 ILPAVVLGTIPLAVIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIVVHALRNAMLPVVT 265

Query: 285 GFPSAFISIFFTGSMLIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIIS 344
                 +     G++L E +FS  G+G    +A  +RDYP+V   + ++  + +L++++ 
Sbjct: 266 VI-GLQVGTLLAGAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLV 324

Query: 345 DLTYMWVDPRI 355
           DL Y  V+PRI
Sbjct: 325 DLLYGVVNPRI 335