Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., microcin C ABC transporter permease YejB from Klebsiella michiganensis M5al

 Score =  508 bits (1309), Expect = e-149
 Identities = 248/365 (67%), Positives = 302/365 (82%), Gaps = 6/365 (1%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           M +Y+LRRLLL++PTLWAIITINFFI+QIAPGGPV+QAIA +E    G +     GG   
Sbjct: 1   MGAYLLRRLLLIIPTLWAIITINFFIVQIAPGGPVDQAIAAIEFGDRGGLPGAGDGGM-A 59

Query: 61  AAPTDAPVSG-----YKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESL 115
           A+     VS      Y+G RGLDP+V+ EIT R+GFDKP++ERYF+ML DY  F+FG+SL
Sbjct: 60  ASHARTGVSNISDGHYRGGRGLDPEVIAEITHRYGFDKPLYERYFKMLGDYLRFDFGDSL 119

Query: 116 FRGGDVIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYA 175
           FR   V+ LI + LPVSI+LGLWSTL+IYL+SIPLGI KA+ +GS FDVWSS ++IIGYA
Sbjct: 120 FRSSSVLQLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAVSNGSHFDVWSSTLIIIGYA 179

Query: 176 IPGFLFAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGG 235
           IP FLFAI+LI++FA G+YF  FPLRGLVS NF SLPWYQ++LDY WH+TLP LA VIGG
Sbjct: 180 IPAFLFAILLIVIFAGGSYFDLFPLRGLVSANFDSLPWYQKILDYLWHITLPVLATVIGG 239

Query: 236 FATLSMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFF 295
           FA L+MLTKNSFLDEI KQYVVTARAKG+ E++IL+ HVFRNAML++IAGFP+ FIS+FF
Sbjct: 240 FAALTMLTKNSFLDEIRKQYVVTARAKGVSEKQILWGHVFRNAMLLVIAGFPATFISMFF 299

Query: 296 TGSMLIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRI 355
           TGS+LIEVMFSL G+GLLG+EAT+ RDYP++F +LYI TL+GLLL+IISD++Y  VDPRI
Sbjct: 300 TGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTLYIFTLIGLLLNIISDISYTLVDPRI 359

Query: 356 DFEAR 360
           DFE R
Sbjct: 360 DFEGR 364