Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  479 bits (1233), Expect = e-140
 Identities = 225/334 (67%), Positives = 279/334 (83%), Gaps = 1/334 (0%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +PL   R+  FKAN+RG+WSLW+FL+LF +SL AELIANDKPL++ YD  WY P ++RY 
Sbjct: 4   SPLNRRRFELFKANKRGWWSLWLFLILFGLSLGAELIANDKPLVVHYDDGWYFPALKRYP 63

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131
           ET FGGEF  EA+Y  PY+  L+  K   ++W  I F Y +IN+D+    P+ P SVNWL
Sbjct: 64  ETTFGGEFPLEANYKSPYIRELLAAKNAWVLWAPIPFSYQSINYDLKVPAPAPPSSVNWL 123

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTDD+GRDVLAR+IYGFRISVLF   LTV+SS+IGV+ GA QG+YGGW+DL GQRF+E+W
Sbjct: 124 GTDDQGRDVLARVIYGFRISVLFALTLTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEIW 183

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
           SG+P L+LLIIL+SFV+PNFWWLLGIM+LFSWMSLV VVRAEFLR RN +YVRAA+A+G+
Sbjct: 184 SGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGM 243

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
            +  I+ RH+LPNAMV+++T MPFIL+G++ TLT+LDFLGFGLP G+PSLGEL+AQGK+N
Sbjct: 244 QNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPPGAPSLGELVAQGKSN 303

Query: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           LQAPWLGISAF VL+VML+LLVFIGE+ RDAFDP
Sbjct: 304 LQAPWLGISAFAVLAVMLSLLVFIGESARDAFDP 337