Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  149 bits (377), Expect = 7e-41
 Identities = 80/241 (33%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 110 YDTINFDITGSVPSAPDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLI 169
           +D +  ++ G++  AP  V+W GTD+ GRDV AR++YG RI++    ++TVI   IG+L+
Sbjct: 61  HDPLLQNLAGAL-QAPSGVHWFGTDEYGRDVFARLVYGSRITLYIVLLVTVIVGPIGLLV 119

Query: 170 GATQGYYGGWLDLFGQRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGV 229
           G   GY+GGW+D    R  +++   P+L L +   + + P     +  + L +W  +  +
Sbjct: 120 GTVSGYFGGWVDSLFMRITDIFISFPSLVLALAFIAALGPGLEHAVIAIALTAWPPIARL 179

Query: 230 VRAEFLRCRNFDYVRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDF 289
            RAE L  RN D+V A Q  G S  RIILRH++P  + + +  +   ++  + T  +L F
Sbjct: 180 ARAETLPLRNADFVVAVQLQGASSTRIILRHIIPMCLSSVIIRLTMNMASIILTAAALGF 239

Query: 290 LGFGLPAGSPSLGELLAQGKANLQAPWLGISAFVVLSVMLTLLVF--IGEAVRDAFDPHL 347
           LG G  A  P  G +++ G+  +   W  ++A    ++ML  L F  +G+ +RD  DP  
Sbjct: 240 LGLGAQAPLPEWGAMISTGRRYMLESWWLVAA-PGAAIMLVSLAFNLLGDGLRDVLDPRS 298

Query: 348 Q 348
           Q
Sbjct: 299 Q 299