Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  446 bits (1146), Expect = e-130
 Identities = 209/334 (62%), Positives = 270/334 (80%), Gaps = 1/334 (0%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +PL   R  RF++NRRG+WSLW+F  LF ++L  ELIANDKPLL+ Y  + Y P+ +RY+
Sbjct: 6   SPLARRRLERFRSNRRGWWSLWLFCGLFALTLGGELIANDKPLLVSYQHSLYFPVFKRYT 65

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEE-KGQIIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131
           E QFGGE   + DY   YV +LI +  G +++P I F  DT N+D+T   PS P + NWL
Sbjct: 66  EQQFGGELPFQPDYRSDYVRTLISKGDGWMLFPPIPFSDDTPNYDLTTPAPSPPSAENWL 125

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTDD+ RDV+AR+I+G R+S+LF   LT IS+LIG+  GA QGYYGGW+DLFGQR +EVW
Sbjct: 126 GTDDQARDVMARVIFGARVSILFALALTFISALIGISAGALQGYYGGWVDLFGQRLLEVW 185

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
           SG+P L+LLIILS FVEP+FWWLLGIM LFSW++LV VVRAEFLR RN +YV+AA+A+G+
Sbjct: 186 SGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAARALGL 245

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
            D ++I+RH+LPNAM A+L+ +PFIL+G+++TLT+LDFLGFG+PAGS SLGEL+AQGK N
Sbjct: 246 GDRKVIMRHILPNAMTATLSYLPFILTGAISTLTALDFLGFGMPAGSASLGELIAQGKQN 305

Query: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           LQAPWLG++AF  L+++LTLLVFIGEA+RDAFDP
Sbjct: 306 LQAPWLGLTAFFALALILTLLVFIGEALRDAFDP 339